Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01307 ATGGCGGTGCGGGCCACAGTGTCGCGTTTCCCGATGGACACGGACGCGCGCGAGGGCTCCGGGCTCCTCTGGGGAGTGACCGTCACGCCCTTCGCGGCCGCCGACGAGAACGACCGCGCTCCGTCGTACGGCTCCGGCGGCGACCTCTTGCCCCGCTGCGAGAACTGCTGGGCCTACTTCAACACCTACTGCGAGCTCGAGCAGTGGTCCTGGTCCTGCTCCCTCTGCGGCAACCTCAACGGCCTCTCCTCCGACGCCATCGACCGCTACTCTCGCCCTCAGTCCTGCGCCGAGATGATGTCCTCCTTCGTAGATCTCGAATTGCCTTCGCAGGAATCGGCGGAGGAAGCGGCAATGCAGGCGTGTCCCGTTTATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTTCTAGAACTTACCAAAAGTGCATTGCTGGCAGCTCTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGATTGTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTCATCCCCCCTGATGCAGAGGGAACCTTACCTATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGAAACTTGTAAGGACCGTATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCAGCAGGTCAAGGGCTGGATGGTGTTCTGATAGGTGGGCGTGGTTTTGGGATGGCAATGGAAGCTCTCTGCAATTACCTTGGATCCGAATATGGGAACACTTTTGCTTTAGCTAGAGTCTTTGCCTTCTTGTCTGGTCCCCCTGATTATGGAGCTGGACAATTGGATACAAGACGGTATGGTGAACAATATGCAAGCAAAGGAGAGGATGCAGATCGTGCTTTACTCCCAGAGCAGACACCCTTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCCTAAAATTTCTGAGCATTGAAAGTGGGGGTTCCTTATTTTTATACACAAGTACCGAGGATTCAACATTGCCTCAGGACATGTATCGAATGCTGAGTCGACCATATGCTTTTGGTTGTGTCCTGCGGTTAAGAACCTCAACTGAATTTAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACGTCATATGTTGTGATTCTTATGCTACATATGCTTACGACTTTGTGTTTGAGAACAATGTTGGATTTTCAAGAACTAGATCAGATGTTCCTACAATTCAGATTGCATTTCAGTACTCAGTTGTAGTTCCTCCTCAGGAACTTTCTAATTCTAATTCTGATTCAGGAGGGGTTTCTACAAATAGAACCAAGCATTCCCTTCAGCGCCGGCTAAGGATTCGGACATTGCAATTTGGTGTTGCTCAGAACATTCATGAACTTTATGATAGCTGTGATCCTGAAGTTGTTTTATCTTTGCTTGTTCACAAGGTTATATTAGCCTCATTGGAGGAAGGAGTTAGGGAGGGTAGAATTTTGCTTCAAGAATGGCTAGTTATCCTCACAGCTCAGTACAATGATGCATATAAGCTTATTCAGTATAATAATGGAAGTTCCATAAGATCTCAGATTGATGTTGCATTCTCTCAATGTCCTCAATTGCAGCCCCTACCACGCCTAATTTTTGCTCTCCTTAGAAATCCTCTTCTCCGCTTTCATGAAGAGGGTGTTCATCCTGACTATCGCATCTATCTTCAATGCCTTTTCAGCATGTTGGAACCCAGTTCCCTTCATCGCGCTGTGTATCCCGTGTTGACATCATATGCTACTCCAGATAAACAAGCATATCCTCGCCATTCATTGAGCCGTGCAGCACTGATTACCAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTCTGATTGTGTTTTATTCTTCGACTGCAGATCCAACACTTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGGACAACAATCAACAAATTGAAGCAAGAGAGATGCATCACTCCCAAACTCATTTTCATTCGAGGAGGGCAGGATGATGCGTCAATTTTTGAGAACTTTCTGATTGAAGAGCAGGATGTTGATGGAAGTGGTCTTACCAGTGTGATGGGTTTTGTTTCCTTCCTTGAAGATATTACACAGAAAGTTTTAGAATTCATGAAATAG 2250 0.4627 MAVRATVSRFPMDTDAREGSGLLWGVTVTPFAAADENDRAPSYGSGGDLLPRCENCWAYFNTYCELEQWSWSCSLCGNLNGLSSDAIDRYSRPQSCAEMMSSFVDLELPSQESAEEAAMQACPVYVAAVDLSSSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDVMPLLQFLAPVETCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGMAMEALCNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHVICCDSYATYAYDFVFENNVGFSRTRSDVPTIQIAFQYSVVVPPQELSNSNSDSGGVSTNRTKHSLQRRLRIRTLQFGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYNNGSSIRSQIDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRTTINKLKQERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01307 749 Gene3D von Willebrand factor, type A domain 122 379 IPR036465 -
Pumo11g01307 749 Pfam Sec23/Sec24 trunk domain 122 374 IPR006896 GO:0006886|GO:0006888|GO:0030127
Pumo11g01307 749 SUPERFAMILY Zn-finger domain of Sec23/24 48 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Pumo11g01307 749 Pfam Sec23/Sec24 helical domain 504 616 IPR006900 GO:0006886|GO:0006888|GO:0030127
Pumo11g01307 749 SUPERFAMILY vWA-like 123 377 IPR036465 -
Pumo11g01307 749 SUPERFAMILY Helical domain of Sec23/24 504 620 IPR036175 GO:0006886|GO:0006888|GO:0030127
Pumo11g01307 749 Gene3D - 29 101 - -
Pumo11g01307 749 Gene3D Sec23/Sec24 helical domain 474 633 - -
Pumo11g01307 749 PANTHER SEC24-RELATED PROTEIN 3 742 - -
Pumo11g01307 749 SUPERFAMILY beta-sandwich domain of Sec23/24 3 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01307 - - gmx:100807557 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01307 11 42862160 42871294 Pumo11g01307 11 42862160 42871294 ECH