LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo11g01292	ATGACTCGCGTTTTGGTTCAGAGGGGTTCTTCAGGTGGCGGTTCTTCGTCGAACCCGAACCGGAGTGGTGGTGGCTCTTCTTCTAATTCCTCGGCGCGGGTGGAGCCGCAGGTTTCGGCTTCGCCGGAGAATAGCGACGAGGTTGTTGTTGTTGTTGTGTCGGATGAGGTTTTGGAGAGTGGTGATAAGGGGAAGAGTAAGGAGGGTGTTCATTTTGAGCAGGGTGATGGGTCCTGTGAAGATGACGTGGCTGCTGCTGCTGGTGTCGTTGTTGTTGAGAGTGATGTTAGGGAGGAGATTGTGAAGGGCTTGAGTGGGCTTAGAGTTGGTGAAAGGGTTGCTTCGGAGAGTGAGGGTTCGAGTGGGGATTCTTCTTCACTCCCTGTTGGTGGTGGTTCGTGTCCCCCGCCGCCTCCGGTGCCGCCTCCCAAGCCTTCCGTGGCGGGGAACTTGAATTCGAGGAGGAGTGTGGCCGGGAGTTTGAATTCCGGCAGCGTGGGATCGTCAAGGAGGGCGGCTGCGTGGCCGGTTGTTTTGGCTAGGACTTCGCCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAATAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTCAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGAGCTGTTGCAGATCAGGTGTATGGGGATTCTGAAGTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGAGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGCTTCACATCTTACTGCAAGAGAAAAAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGCCCAATTCACATATACTCCTACACCACAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACACACCACCAATTCGATTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGGTGCTTGACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGATCAAATGTTGACAAAAATCAAGTCAAGGCTGCTATTAAAGCTCAACAGGACCAACAGATCAATAATGCACTTTTAGCCGAGGGTCGGTTTTATTCTGATCTTGAGCTCACAGAAAAGGAAATTGAACGCATGGTGATTGAAGTTTCTCGAGCTGAGTACCTTGCAGATAGTACATTTAAGCAACAGCTTGGCGATAGAGAGTCCTCTACCTCAAACGCTGAACCATCATCTTCTGGAGCAACAGGATCATCGGGCACGGATCGCAAGACGGAACATGGGAAAGAGCATGGTTCTGATCTGAGTAGCGGTATGCAGATGTTACTATCAATGGGATTCAGTTACATGCAAGCGATTGAGGCTTACAGCATATTTGGGGACGATGTTGATTCTATGGTTTGTTACCTGTTAGAAACCGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATGA	1572	0.4809	MTRVLVQRGSSGGGSSSNPNRSGGGSSSNSSARVEPQVSASPENSDEVVVVVVSDEVLESGDKGKSKEGVHFEQGDGSCEDDVAAAAGVVVVESDVREEIVKGLSGLRVGERVASESEGSSGDSSSLPVGGGSCPPPPPVPPPKPSVAGNLNSRRSVAGSLNSGSVGSSRRAAAWPVVLARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRCLTIGAGLGFSSLRGSNVDKNQVKAAIKAQQDQQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLADSTFKQQLGDRESSTSNAEPSSSGATGSSGTDRKTEHGKEHGSDLSSGMQMLLSMGFSYMQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo11g01292	523	ProSiteProfiles	OTU domain profile.	234	357	IPR003323	-
	Pumo11g01292	523	ProSiteProfiles	Ubiquitin-associated domain (UBA) profile.	470	511	IPR015940	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	103	167	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	1	79	-	-
	Pumo11g01292	523	SUPERFAMILY	Cysteine proteinases	221	356	IPR038765	-
	Pumo11g01292	523	SUPERFAMILY	UBA-like	474	510	IPR009060	GO:0005515
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	149	167	-	-
	Pumo11g01292	523	Pfam	OTU-like cysteine protease	242	351	IPR003323	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	1	44	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	434	459	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	182	206	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	131	146	-	-
	Pumo11g01292	523	Gene3D	-	216	367	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	184	198	-	-
	Pumo11g01292	523	FunFam	OTU domain-containing protein 5	215	367	-	-
	Pumo11g01292	523	PANTHER	OTU DOMAIN CONTAINING PROTEIN	183	358	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	432	474	-	-
	Pumo11g01292	523	CDD	OTU_plant_OTU6-like	230	356	-	-
	Pumo11g01292	523	MobiDBLite	consensus disorder prediction	58	78	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo11g01292	Pumo-Chr11	42643527	42650717	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo11g01292	K12655		-	gmx:100809162	849.736

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo11g01292	11	42643527	42650717	Pumo11g01292	11	42643527	42650717	ECH