Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01291 ATGGCGCCAAGGAAACCTCGCGAGCGTGAAATGCTGTTCGACTCCGTCATCGCGCTCGTCTTCATCCTCGTCGCCTGCGTCGACCTCTGCGACGGCGCCACCGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGGCTCGCCAGCCTCAACCACCACGCCGCCTCGCTCCACTTCTCTCCACACGCCGATCTCTCTCGCACCGTCCTCCTCATACCACTTCGCGAACTCAACATGTCTTTTGTCAAAGAATATATTGCTGAAAGCAAGCCTCTTGGGGGTTTAATATTTTTGGTTCCCCGGATGTTCAGTTTTGAAAACAAAGATGGTATGGGAAGTAATCATCAAGATGGGAGTAAAGAACTGCTGAAGAATGTATTGGATGAACTTGAACAAATACTTATACATGCCAACTTACCTTATCCTGTTTATTTTGCATTTGAGGATGATAACATTGATGCTGTGTTAACTGATATCAAGAAGAATGATGTCACTGGTCAGCCTGCTACTGCAACAACTGGCGGATACAAATTTGTAGTTTCAGCCCCAGAACCAAAGAAAGTTGCATCTCCTCCCATTACAAATATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATGATGCTCATCAATTACCCACCATTGCGATAGTTGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGCGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTCTTATATTCTAATCCAAAGACAAGAGGACAATACAATCTGCTGTTTGGGCTAACGTCTGGTGGACCTTACAACTACAATGGAACCCGTAAGTGGCTTCGGAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCTTGGGAAGATGATTTGTGGATTCATGTGTCTAAGCCTCCGGAAAATGCCTTTATTAAGAAAATTATGGAAGATTTTTCAAGTGTTGCAGAAGAATTAGGCTTTAAAGTGAATCTGAAGCATAAGAAAATAAACATTTCCAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCTACAGCGCCTGAATTGCTAGAGAAGACTGGTGGTTTGGTTGACGGCAGGCATTTTGTCAATGAAGCGGCTATTGTCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATTCAGATCTTTGCAGATAACAGTAATTTGGCTGTCAATCCTTCGTATGTTCGATCATGGTTAGATGTTTTGTCCCAAACGCCTCGAGTAGCTCCATTTTTCTCAAAAGATGATCCTTTCGTCATGGCACTGAAAAAGGAATTAGAAGATCATACTGATGAGGTAAATCTACATAGAGATGTGCTAGACGGGATGTTCACTTTCTATGATTCAACCAGGGCTAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTATTGGGATCGTATTTGATTGTGCTCTTCAGTTTCTTGGTCATCACCACTAGGGGTCTTGATGATCTAATCAGTCTATTTCGGCGGCCTCCCTCTCGAAAAGTGAAAACTGCATAG 1689 0.444 MAPRKPREREMLFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVKEYIAESKPLGGLIFLVPRMFSFENKDGMGSNHQDGSKELLKNVLDELEQILIHANLPYPVYFAFEDDNIDAVLTDIKKNDVTGQPATATTGGYKFVVSAPEPKKVASPPITNIQGWLAGLKTDDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLDSIGSWEDDLWIHVSKPPENAFIKKIMEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLEKTGGLVDGRHFVNEAAIVRSVKLIAESLARHIYGHQGKNIQIFADNSNLAVNPSYVRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLHRDVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01291 562 CDD M28_nicalin_like 135 428 - -
Pumo11g01291 562 Coils Coil 473 493 - -
Pumo11g01291 562 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Pumo11g01291 562 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pumo11g01291 562 PANTHER NICALIN 11 562 IPR016574 GO:0009966|GO:0016020
Pumo11g01291 562 Pfam Nicastrin 223 360 - -
Pumo11g01291 562 SUPERFAMILY Zn-dependent exopeptidases 187 385 - -
Pumo11g01291 562 Gene3D Zn peptidases 131 425 - -
Pumo11g01291 562 PIRSF Nicalin 3 557 IPR016574 GO:0009966|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01291 5 560 EF-hand Containing Proteins AT3G44330 73.036 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01291 K26499 - gmx:100779713 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01291 11 42632371 42642105 Pumo11g01291 11 42632371 42642105 ECH