Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01267 ATGTCCATTAAGGAGTGCCGCCACCACTCAGGCCAACGCCACCACCTCCTCCGCCTCATCCTGGGCGCCGCCGCCGCCCTCATCGTCCTCATCCTCCTGGTGATCTTCCTCATCTGGGTGATCCTCCGCCCCACGAAGCCCCGCTTCACGCTCCAAGACGCCACCCTCTACGCCTTCAACCTCTCCACCCCCACCCCCAACACCCTCACCCTCACCATGCAGGTCACCCTCTCCGCCCACAACCCCAACGCGCGCGTCGGCGTCTACTACCACGCGCTCCACGTGTACGCCTCCTACCGCAGCCAGCAGATCTCCCTCGCCACGGCTCTCCCCGACACCTACCAGGGCCACCGCGACTTCACCGTCTGGTCGCCCTTCCTCTTCGGTAACACCGTCCCCGTCGCGCCGTTTGTGCTGAGTTCTCTGCAGCAGGACCAGAGCGCCGGCACCGTTCTGGTCAACCTTAAGGTCAACGGGAGGGTCAAGTGGAAGGTCGGCTCCTGGGTCTCCGGGAGGTACCATATCTACGTCAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGCAATGCCGTCGGCGTTGTGGCTCCGCCGGTGAAGTTTCGCCTCTTGCAGAGTTGCAGTGTTGATGTGTAA 639 0.6322 MSIKECRHHSGQRHHLLRLILGAAAALIVLILLVIFLIWVILRPTKPRFTLQDATLYAFNLSTPTPNTLTLTMQVTLSAHNPNARVGVYYHALHVYASYRSQQISLATALPDTYQGHRDFTVWSPFLFGNTVPVAPFVLSSLQQDQSAGTVLVNLKVNGRVKWKVGSWVSGRYHIYVNCPAYISFAGDRSNAVGVVAPPVKFRLLQSCSVDV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01267 212 PANTHER OS05G0367900 PROTEIN 20 210 IPR044839 GO:0098542
Pumo11g01267 212 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01267 Pumo-Chr11 42295464 42296889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01267 21 179 EF-hand Containing Proteins AT5G21130 22.642 1.37e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01267 - - gmx:100812905 347.821