Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01266 ATGGCACTGGTGGCCCAACTTGACTTAGATTGGGCCTTGTGGACACTGGGTGGGAGTTATTACATTAGACAAGGGGTTGTTGGAATGGAGGAGTATTTTGGTATTCTCAATTCGGATTGGACCCTGGTTAGGAACACAAGTTTCTTGCAAAGGAACTCTGCTATTCAACTTCCTTTTCAAGGGCCAGGGTTATTAGAAGCTAAACCATACAAAGTGATTTTTCACCCATTGACAGGTCTTTGCATCTTAAGAAAGCTACCGGTTGAGCCATTGAGGTTGGGACCTTGTTCTAATTCTGATGGATGGGAATACACAGACCAAAAGATACTATCAATAAAGGGTACCTATTTCTGTCTACAAGCAGAGGAAGAAGGGAAGCAAGCAAAAATTGGGAATATATGTTCAGGTCCCAATTCAAGATGGGAAATGATCTCTGATTCAAAGATGCACCTCTCGAGTCAAATCAACAATGCTTCTGGTGTGTGTCTTGATGTAGACACCAACATCATTGTCACCAACACTTGCAAATGCCTGAGCAAAGATAACACTTGTGACCCTGGAAGCCAGTGGTTCAAACTTGTTGACAGCACAAGGAAGTCAACCTCCACATTATCTATGGACTCCATGTTGAGTTTCTTAGAAAATAAAATTTCTAGAAACCATTGA 666 0.4174 MALVAQLDLDWALWTLGGSYYIRQGVVGMEEYFGILNSDWTLVRNTSFLQRNSAIQLPFQGPGLLEAKPYKVIFHPLTGLCILRKLPVEPLRLGPCSNSDGWEYTDQKILSIKGTYFCLQAEEEGKQAKIGNICSGPNSRWEMISDSKMHLSSQINNASGVCLDVDTNIIVTNTCKCLSKDNTCDPGSQWFKLVDSTRKSTSTLSMDSMLSFLENKISRNH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01266 221 SUPERFAMILY Ricin B-like lectins 67 193 IPR035992 -
Pumo11g01266 221 CDD RICIN 70 193 IPR000772 -
Pumo11g01266 221 Gene3D - 72 192 - -
Pumo11g01266 221 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01266 Pumo-Chr11 42285613 42287043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01266 1 201 Glycoside Hydrolase AT3G26130 51.707 2.21e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01266 - - gmx:100816102 370.933