Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01260 ATGGAAAAACATGACGGAAAGAAGAGAGTGGTGATCCTAGGAGGAGGTGTTGCGGGTTCCCTCGTCGCTAAATCACTCCAATTTCATGCCCATGTCACCCTCGTTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGGTCGGTGATCAATCATAGAGATTACCTTGTCAATGGTGACATCATTACGTCCAATGCCGTCAATGTTACAGAAACTGAAGTGTTGACTGCAGATGGTCATCAAATTGGCTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCATGTCCCCAAAAATAGGAGGGAAAGACTTAATCAGTTCAAAGCAGATAATCAAAAGATAAAATCTGCTCATTCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCTGGAGAGATAGCTATTGATTTTCCGAATAAGAAGGTTACAATAGTGCATAAAGGACCGAGGCTGCTAGATTTTGTAGGGACAAAAGCTGCAGATAAGACTCTAAAATGGTTGGAATCAAAGAATGTTGTGGTGAAACTAGAGCAATCAATTGACTTGGACGAGTTAATAGATGAACAAAAGATATATCGTACATCAAATGGAGAGATCATTGAGGCAGATTGTTATTTCTTATGTTTAGGGAAACCACTTGCATCAGCATGGCTTGAGGAAACTATGTTGAAGTATGACTTGGATGATGAAGGAAGGCTTAAGGTAGATGAAAGATTGAGAGTCGTTGGTCGGAGGAACATTTTTGCAATTGGAGACATTACAGATGTTCCAGAAATCAAGCAAGGGTTTGCGGCTCAGCAGCATGCTGAAGTGGTTGTGAAGAACTTGAAGGTGATTATAGATGGAGGAAGAGAATGTAGTCAATGGAGGATGGAAACTTACAAGCCACAGTTAGCAATGGCAATAGTTTCACTTGGGAGGAAAGATGCAGTGGCACAGTTACCATTATTGACAATCATTGGAAGAATTCCTGGATTCATCAAATCTGGAGATTTGTTTGTTGGTAGAACAAGAAAACAAATGGGACTCAATCCTAATATTCCATATGCTTGA 1101 0.4087 MEKHDGKKRVVILGGGVAGSLVAKSLQFHAHVTLVDPKEYFEITWASLRSMVEPSFAERSVINHRDYLVNGDIITSNAVNVTETEVLTADGHQIGYDYLVIATGHADHVPKNRRERLNQFKADNQKIKSAHSILIIGGGPTGVELAGEIAIDFPNKKVTIVHKGPRLLDFVGTKAADKTLKWLESKNVVVKLEQSIDLDELIDEQKIYRTSNGEIIEADCYFLCLGKPLASAWLEETMLKYDLDDEGRLKVDERLRVVGRRNIFAIGDITDVPEIKQGFAAQQHAEVVVKNLKVIIDGGRECSQWRMETYKPQLAMAIVSLGRKDAVAQLPLLTIIGRIPGFIKSGDLFVGRTRKQMGLNPNIPYA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01260 366 SUPERFAMILY FAD/NAD(P)-binding domain 3 272 IPR036188 -
Pumo11g01260 366 Gene3D - 6 349 - -
Pumo11g01260 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Pumo11g01260 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Pumo11g01260 366 PRINTS FAD-dependent pyridine nucleotide reductase signature 132 150 - -
Pumo11g01260 366 FunFam apoptosis-inducing factor 2 6 357 - -
Pumo11g01260 366 PANTHER APOPTOSIS-INDUCING FACTOR 1 4 359 - -
Pumo11g01260 366 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 284 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01260 Pumo-Chr11 42239541 42242480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01260 10 276 EF-hand Containing Proteins AT4G28220 23.795 3.08e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01260 K22745 - gmx:100785294 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01260 11 42239541 42242480 Pumo11g01260 11 42239541 42242480 ECH