Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01259 ATGGAAAAAGATGGGAAGAGAGTGGTGATTCTAGGAGGTGGCGTTGCGGGATCCGTCGTCGCTAAATCTCTTCAATTCCATGCCCATGTCACCCTCGTTGATCCGAAAGAATATTTTGAGATTACATGGGCAAGTTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGGTCAGTGATCAATCACAGAGATTACCTTACCAATGGCGACATCATTACATCCAATGCCATCAATGTTACAGAAACTGAAGTGTTGACTGCAGATGGTCATCGAATTGGTTATGACTATCTTGTTGTTGCCACTGGCCATGCAGATCCTGTCCCCAAAAGTAGGAGGGAGAGACTTAATCAGTTCAAAGAAGACAATCAAAAGATAAAATCTGCTCAATCCATTCTCATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCGGATAAGAAGCTTACACTAGTGCACAAAGGATCGAGGCTACTGGAATTTGTAGGGGCAAAAGCTGGGGATAAGACTCTAAATTGGTTAAAATCAAAGAATGTTGCGGTGAACCTAGAGCAATCAGTTGACTTGAAAGCATTCACAGATGGACAGAAGATATATCAAACATCAAATGGAGAGACCATTGAGGCAGATTGTCATTTCTTATGTATAGGGAAACCACTTGCTTCAGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGGTCAAGGAAGGGTCAAGGTAGATGAAAGATTGAGAGTCATGGGCCGGAACAACATTTTTGCAATTGGAGATATTACAGATATACCAGAAATCAAGCAAGGGTTTTTGGCACAACAGCAGGCTGAAGTGGTTGTGAAGAACTTGAAGGTGATAATAGAGGGAGGAAGGGAATGTAGGATGGAAACTTACAAGCCACATTCAGCAATAGCGATAGTTTCACTTGGGAGGAAAGATGCAGTGTTACAGTTACCATTCTTGACAATCACTGGAAGAATTCCTGGATTCATCAAGTCTAAAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAATCCGTGA 1071 0.4202 MEKDGKRVVILGGGVAGSVVAKSLQFHAHVTLVDPKEYFEITWASLRSMVEPSFAERSVINHRDYLTNGDIITSNAINVTETEVLTADGHRIGYDYLVVATGHADPVPKSRRERLNQFKEDNQKIKSAQSILIIGGGPTGVELAGEIAVDFPDKKLTLVHKGSRLLEFVGAKAGDKTLNWLKSKNVAVNLEQSVDLKAFTDGQKIYQTSNGETIEADCHFLCIGKPLASAWLKETVLKNDLDGQGRVKVDERLRVMGRNNIFAIGDITDIPEIKQGFLAQQQAEVVVKNLKVIIEGGRECRMETYKPHSAIAIVSLGRKDAVLQLPFLTITGRIPGFIKSKDLFVGKTRKQMGLNP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01259 356 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Pumo11g01259 356 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Pumo11g01259 356 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Pumo11g01259 356 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 274 IPR023753 GO:0016491
Pumo11g01259 356 FunFam apoptosis-inducing factor 2 4 352 - -
Pumo11g01259 356 Gene3D - 4 351 - -
Pumo11g01259 356 PANTHER APOPTOSIS-INDUCING FACTOR 1 4 354 - -
Pumo11g01259 356 SUPERFAMILY FAD/NAD(P)-binding domain 3 286 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01259 Pumo-Chr11 42230671 42233931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01259 8 274 EF-hand Containing Proteins AT4G28220 23.565 5.63e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01259 K22745 - gmx:100818210 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01259 11 42230671 42233931 Pumo11g01259 11 42230671 42233931 ECH