Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01258 ATGGTAGAGAAGAAAGTGGTCATCATAGGAGGTGGTGTTGCCGGTGCCAACCTTGCAAAAACTATACAACATCAAGCCAACGTCACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGATTGGTTGAGCCATCTTTTGCTGAAAGGATAGTGATCAACCATAGAGAGTACTTCAAAAAGGGTGACCTTGTTGTATCCAGTGCTGTCAACATAACTGAAACTGAAGTGCTGACTGCAGATGGCCAGCAGATTGCCTATGACTATCTTGTTGTTGCTACTGGCCACACAGAACCTATCCCCAAAACCAGGAGTGAAAGACTTGACCAATACAAAGGAGAAAATGCAAAGATCAAATCTGCAAAGTCAGTTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGATAAGAAGGTCACCGTAGTGCATAAAGGATCAAGGTTGCTGGAATACATTGGGACTAAAGCTTCAAGTAAGACTCTAAAGTGGCTCAAATCAAAGAAAGTTGATGTGAAATTAGAGCAATCAGTCGACTTGAGCTCCTCTTCAGAAGAAAATAAGACATATCAAACATCAAATGGAGAGACTATAGAAGCAGATCTTCATTTTCTATGCACAGGGAAACCACTTGGTTCAGCATGGCTTAGAGAAAGTCTTCTAAAGGATGACTTGGATGCTGAGGGAAGGATCAAGGTCGATGAACACTTGAGAGTGAAGGGCAGGAGCAACATTTTTGCAATTGGAGATATTGTAGATGTTCAAGAAATCAAACAAGGGGTGTATGCAAGTGGTCATGCTCAATTGGTTGCCAAAAACTTGAAGCTATTGATAGAGGGTGGAGGCAAAGAGCGTAAGTTGGGAATATACAAGGCACAGCCACCAATATCTATAGTTTCACTTGGAAGGAAACAAGCAGTTGCACAGTTCCCATTCATGACAGTGCTTGGAAGGTTTCCTGGCATGATCAAATCAGGAGATTTGTTTGTGGGGAAAACCAGAAAGGAATTAGGACTTGAACCTAATGTTAAAAAATCTTAA 1083 0.4192 MVEKKVVIIGGGVAGANLAKTIQHQANVTLIDPKEYFEIPWASLRGLVEPSFAERIVINHREYFKKGDLVVSSAVNITETEVLTADGQQIAYDYLVVATGHTEPIPKTRSERLDQYKGENAKIKSAKSVLIVGGGPTGVELAAEIAVDFPDKKVTVVHKGSRLLEYIGTKASSKTLKWLKSKKVDVKLEQSVDLSSSSEENKTYQTSNGETIEADLHFLCTGKPLGSAWLRESLLKDDLDAEGRIKVDEHLRVKGRSNIFAIGDIVDVQEIKQGVYASGHAQLVAKNLKLLIEGGGKERKLGIYKAQPPISIVSLGRKQAVAQFPFMTVLGRFPGMIKSGDLFVGKTRKELGLEPNVKKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01258 360 Gene3D - 1 346 - -
Pumo11g01258 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Pumo11g01258 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Pumo11g01258 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Pumo11g01258 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 353 - -
Pumo11g01258 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Pumo11g01258 360 FunFam apoptosis-inducing factor 2 2 351 - -
Pumo11g01258 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 280 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01258 Pumo-Chr11 42224518 42228223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01258 6 272 EF-hand Containing Proteins AT4G28220 25.000 3.06e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01258 K22745 - gmx:100817682 642.114