Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01245 ATGGGAAAGAAGCAGAACGAGAGCCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAGGCAGCACAACCAGCTGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGGTTCTCGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCATCGAGCAATCCCTCGAACCACTCCCCGAAATCGCCGCCGCTTCAACCACTCTCATCAGCCTTGATCCAGGTTCTGTGGCCGATGAAACGACGCCGGAAGAAGCGAGGAAGCAGCAGAAGCAAGAGGAGGCGCTCCACGCCAGCAGCCTCCGCGTTCCGCGCCGCCCGCCCTGGACTCCCGACATGTCCGCCGAGGAGCTTCACGACAGCGAAACGCAAGCTTTCTTAATGTGGCGCCGCAGCTTAGCGAGGCTTGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAGAATCTTGATATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATCTGCTTGTTATGGTCGTTGATTCACGAGATCCGCTGTTCTATCGTTGCCCAGACCTTGAGAATCACAAGTTCTGTGTTCCAAGCATGATCTGTTTTGCACCTATTTTACTTTGGTACAGGCTTATGCACGAGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGCATCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCGGCTAAAGCTGCTACTGCTGCCCTGGAAAGGCAAAAAGCTTGGTTCATCATGGGAGGATGATAACATGGGGAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAGCTTTTGGCCTGCTTGCAATCAGAGGCAGAAGAGATAGTTGACAGGAGGAGAAATTCAGGCTCCTTTGATGTAGGACCATCTAACACTAAATCCCCTGCTGAAAATACTGCTGGTAGTTCATCGTCGAGTAATGTAGTTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGCACTGGTGTCACCTCTACCCCGGGGAAAACAAAGCACTTTCAGACATTAATTATCTCTGATGAGTTGACCCTTTGTGATTGTCCTGGATTGGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTGTTCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATCGAGGAGATTTACAAGATCAGGCTTCCTAAACCTAAGCCATATGAGTCCCAATCCCGTCCCCCACTAGCATCTGAACTTTTGAGAGCATATTGTGCTTCTCGTGGGTATGTTGCCTCTAGTGGACTCCCTGATGAAACCAGGGCTGCCCGTCAGATATTGAAAGATTACATAGACGGGAAGCTGCCTCACTATCAAATGCCTCCTGTTGCATTAGATGAGGAACAAGCTTTGGAAGAACCCACTGGACATGACTCAGTTGACTTGCATGCATCAGATTCATCTGGTATTGAAGATTCTTCAGATGTTGAGAGTGAACTTGCACCAAATCTTGAACATGTATTGGATGACCTCAATTCATTTGACATGGCTAATGGACTTGCTCCGAAAAATACTACTGTTAAGAAGCCTAAGGCATCTCATAAGCACCATAAAAAGCCACAGAGGAAAAAAGATCGATCTTGGAGAGCAGGAAACGAGGATGCTGATGGGATGCCAGTTGCAAGATTCTTTCAGAAACCAGCAAATACAGGTCCCATGAAGGTTGTTTAA 1836 0.4717 MGKKQNESQKTGLGRALVRQHNQLIQQSKDKSRFYRKKVLESFTEVSDIDAVIEQSLEPLPEIAAASTTLISLDPGSVADETTPEEARKQQKQEEALHASSLRVPRRPPWTPDMSAEELHDSETQAFLMWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLENHKFCVPSMICFAPILLWYRLMHERLMSINAHCFWLIRQIFYLHLSERNGQNIFVLMIFSSSSGRLKLLLLPWKGKKLGSSWEDDNMGRTNSPDTKIYGRDELLACLQSEAEEIVDRRRNSGSFDVGPSNTKSPAENTAGSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVPRHVIEEIYKIRLPKPKPYESQSRPPLASELLRAYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYQMPPVALDEEQALEEPTGHDSVDLHASDSSGIEDSSDVESELAPNLEHVLDDLNSFDMANGLAPKNTTVKKPKASHKHHKKPQRKKDRSWRAGNEDADGMPVARFFQKPANTGPMKVV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01245 611 MobiDBLite consensus disorder prediction 507 525 - -
Pumo11g01245 611 PRINTS GTP1/OBG GTP-binding protein family signature 381 396 IPR006073 GO:0005525
Pumo11g01245 611 PRINTS GTP1/OBG GTP-binding protein family signature 335 355 IPR006073 GO:0005525
Pumo11g01245 611 Pfam 50S ribosome-binding GTPase 335 391 IPR006073 GO:0005525
Pumo11g01245 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 465 IPR027417 -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 304 330 - -
Pumo11g01245 611 FunFam Large subunit GTPase 1 395 496 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 507 534 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 563 580 - -
Pumo11g01245 611 Gene3D - 154 201 IPR027417 -
Pumo11g01245 611 Gene3D - 277 391 IPR027417 -
Pumo11g01245 611 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 271 584 IPR043358 GO:0003924
Pumo11g01245 611 MobiDBLite consensus disorder prediction 81 101 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 309 330 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 1 23 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 550 611 - -
Pumo11g01245 611 MobiDBLite consensus disorder prediction 74 109 - -
Pumo11g01245 611 Gene3D - 394 496 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01245 Pumo-Chr11 41960577 41964361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01245 K14539 - gmx:100817523 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01245 11 41960577 41964361 Pumo11g01245 11 41960577 41964361 ECH