Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01239 ATGACTGTGGCGCGAGGGCTCGCGGTGGTGTTCGTGTTGTTCGCTGTGTACTGTGGGCTGGACCCGTTCCAGCACAGCCCAATAGCCCACTTTCCGGACTTCGAGGTCAAGAGGGTGGACATGCCGGCATGGTCCGAGGTTCCGACCGAGCAAGACAAACATAATTTGTTGCAGAAGTCGGAGATTAAGTTCGTGAACGAGGTGCAGGGACCAGAGAGCATTGCCTTTGATCCTCTCGGTCGTGGCCCTTACACTGGTCTCGCTGATGGAAGAATTGTCTTCTGGAACGGTCACTCCTGGCTTCACTTCGCTTATACCTCCCCCAACAGGTCGGAGATATGTAATCCTATAGCATCTGCAACACCATTTAGTTATGTGAAGACTGAGCATATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACAGGTGATTTGTACATTGCAGATGCATATTTTGGGCTCTTGAAGGTTGGGCCTGAGGGTGGCTTAGCAACATCTCTTGTAACTGAGGCTGAAGGGATTCCTCTGAGATTTACAAATGATGTTGACGTTGATACCGAAGGGAATGTTTATTTTACAGAGAGCAGTGCTCATTATCCGAGGAGGAATTTCCTTCAGCTGGTATTTTCTGGGGATGATAGTGGCAGAGTTTTGAAATACAACCTTGTGACTAAGGAAACCACTGTTCTCGTGAGGAACATTCAATTCCCAAATGGCATTTCCTTAAGCAAGGATGGTTCCTTCTTTGTCTTTTGTGAAGGGGTTGTTGGCAGGTTACGTAAATACTGGCTGAAAGGAGAAAAAGCTGGGACTTCAGAGATTTTAGCCATTCTACCTGGATATCCTGACAATGTGAGAGTCAATGAAGATGGTGATTTTTGGGTAGCTCTTCATTCTAGAAGGTATATGTATGCATACTACAATGGTATCTACCCAAAGATAAGGAAAATCATACTCAAGCTTCCTATACCAATAAAGATTCAATACCTGCTTCAAATAGGAGGTCGCCAACATGCAGTAGTTATCAAGTATAGTCCTGAAGGTAGAATTTTGCAGATATTGGAGGACAGTGAGGGGAAAGTTGTTAAAGCAGTGAGTGAAGCGGAGGAGAAGGATGGTAAACTGTGGTTAGGAAGTGTTCTCATGCCTTTTGTTGCAGTGTACAACTTGAAATGA 1182 0.4526 MTVARGLAVVFVLFAVYCGLDPFQHSPIAHFPDFEVKRVDMPAWSEVPTEQDKHNLLQKSEIKFVNEVQGPESIAFDPLGRGPYTGLADGRIVFWNGHSWLHFAYTSPNRSEICNPIASATPFSYVKTEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATSLVTEAEGIPLRFTNDVDVDTEGNVYFTESSAHYPRRNFLQLVFSGDDSGRVLKYNLVTKETTVLVRNIQFPNGISLSKDGSFFVFCEGVVGRLRKYWLKGEKAGTSEILAILPGYPDNVRVNEDGDFWVALHSRRYMYAYYNGIYPKIRKIILKLPIPIKIQYLLQIGGRQHAVVIKYSPEGRILQILEDSEGKVVKAVSEAEEKDGKLWLGSVLMPFVAVYNLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01239 393 Pfam Strictosidine synthase-like, N-terminal 66 94 - -
Pumo11g01239 393 SUPERFAMILY Calcium-dependent phosphotriesterase 48 392 - -
Pumo11g01239 393 FunFam Putative strictosidine synthase 54 393 - -
Pumo11g01239 393 Pfam Strictosidine synthase 182 269 IPR018119 GO:0009058|GO:0016844
Pumo11g01239 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 385 - -
Pumo11g01239 393 Gene3D - 54 393 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01239 Pumo-Chr11 41872022 41876619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01239 - - gmx:100803331 749.969