Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01213 ATGGCTAAGAGCTCATTCAAGATGGAACACCCTCTTGAGAGGAGGCAGGCTGAAGCATCTCGGATAAGAGAGAAGTATCCTGATAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTTGTTCCTGCTGATTTGACTGTTGGCCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAGCTGAGTCCCGAGAAGGCCATCTTCATTTTTGTTAAGAACATTTTACCACCAACTGCGGCAATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGATTCCTATATATGACTTACAGTGGAGAGAACACATTTGGGCTTTTGTTCTGA 363 0.416 MAKSSFKMEHPLERRQAEASRIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLLF 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01213 120 MobiDBLite consensus disorder prediction 1 20 - -
Pumo11g01213 120 CDD Ubl_ATG8 12 114 - -
Pumo11g01213 120 Gene3D - 1 118 - -
Pumo11g01213 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Pumo11g01213 120 FunFam Autophagy-related protein 1 117 - -
Pumo11g01213 120 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Pumo11g01213 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01213 Pumo-Chr11 41486938 41489209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01213 K08341 - gmx:100301895 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01213 11 41486938 41489209 Pumo11g01213 11 41486938 41489209 ECH