Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01198 ATGTCCCAGTTTGGTCGGAGACTCAGCTACTCCCCCACCATCCGGCGACGGTTCCACCACCGCGTTTCCCTGCTCCGGCGGTGCCTCCTCCGCGTGCTCCACCGCATCCTCCTCTGCTCCGGGAGCAAGGCCACCAATGCCACGTACAGCATGCTGCCGCCGGCATTGCCCTCTCCGCCGCCGCCGGCGGGTACCTCCGGCGAGCCTGGCCGTGAAGAGATGGACCTCGCTTCGCCGGCGCTGTTTCACACCCATGACTTGGACTCTGATTTGGTTTCCTTGAAGATCAGCTTGTTGGGGGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGAAAAAGAGCAGCAAAGGAACCAGATGGAAGGGCTAAATCAGATGGACAAAACTTTGGTTGTTAGAGGCGCACGTATATCGTATTGTATCTGGGAAGTACAAGGTGATGGAAAATCAGAAGAGCAAATTCCAATGGCTTGTACGGACTCCGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTCGTAGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACGGCAATTCCAGTGTTGATAGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATTTGCAATGGACCATCGCCAATGAGGCAAGAACATATGCAAAGGCCCTCAATGCCACCTTGTTCTTTTCAAGTGCAACCTACAACATCAATGTGAATAAGATCTTCAAGTTCATCACTGCCAAACTCTTTGACCTACCATGGACAGTGGAGAGGAATCTAACTGTTGGGGAACCCATCATTGACTTCTAA 837 0.4994 MSQFGRRLSYSPTIRRRFHHRVSLLRRCLLRVLHRILLCSGSKATNATYSMLPPALPSPPPPAGTSGEPGREEMDLASPALFHTHDLDSDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQQRNQMEGLNQMDKTLVVRGARISYCIWEVQGDGKSEEQIPMACTDSVAILIMFDLTSRCTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01198 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 269 IPR027417 -
Pumo11g01198 278 ProSiteProfiles small GTPase Rab1 family profile. 88 278 - -
Pumo11g01198 278 MobiDBLite consensus disorder prediction 50 73 - -
Pumo11g01198 278 PANTHER - 91 266 - -
Pumo11g01198 278 Pfam Ras family 95 258 IPR001806 GO:0003924|GO:0005525
Pumo11g01198 278 FunFam Septum-promoting GTP-binding protein 1 84 268 - -
Pumo11g01198 278 PRINTS Transforming protein P21 ras signature 94 115 - -
Pumo11g01198 278 PRINTS Transforming protein P21 ras signature 196 209 - -
Pumo11g01198 278 PRINTS Transforming protein P21 ras signature 135 157 - -
Pumo11g01198 278 PRINTS Transforming protein P21 ras signature 236 258 - -
Pumo11g01198 278 SMART rho_sub_3 96 260 IPR001806 GO:0003924|GO:0005525
Pumo11g01198 278 Gene3D - 86 268 IPR027417 -
Pumo11g01198 278 SMART rab_sub_5 94 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01198 Pumo-Chr11 41349636 41353321 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01198 K07976 - gmx:100780638 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01198 11 41349636 41353321 Pumo11g01198 11 41349636 41353321 ECH