Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01189 ATGTTAATGCAAGTTATACATGAACAGATAGTGGACGAAGAAGCCAGGTTTGAAGCCGAAGTGGCAGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAGGCTAACCAAAAGACCATACACAGCAAGAGATGTGGTGTCCCTCCGAGGCAACCTCAGACAAACCTATGCCTCAAATGAGATGGCGAAAAAGCTATGGCGCATTCTGAAGAACCACCAAGCCAATGGCACAGCCTCAAGGACTTTTGGTGCACTTGATCCTGTTCAAGTGACTCAGATGGCTAAGCACTTGGACACAATCTATGTCTCAGGGTGGCAGTGCTCAGCCACTCACACCACCAGCAATGAGCCAGGCCCTGACCTTGCTGATTACCCTTATGACACTGTCCCCAACAAGGTTGAGCACCTCTTCTTTGCTCAGCAGTACCATGATAGGAAACAAAGAGAGGAGAGAATGAACATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTACTTGAGGCCAATCATAGCTGATGGTGACACAGGTTTTGGTGGCACCACAGCAACTGTTAAGCTTTGCAAGCTGTTTGTGGAGAGAGGTGCTGCTGGCATCCACATTGAGGACCAGTCTTCTGTGACCAAAAAGTGTGGCCACATGGCTGGGAAAGTGCTGGTTGCCATCAGTGAACACATCAATAGACTTGTGGCTGCAAGGCTTCAGTTTGATGTCATGGGGGTGGAAACTGTTTTGGTGGCCAGAACAGATGCAGAAGCTGCTAATTTGATTCAATCAAACATTGACACTAGGGACCATCAGTTTATCTTGGGAGTGACCAACCCCAACCTTAGGGGGAAGAGTTTGGCAACTCTTATGGCACAAGGCATGGCTGCTGGGAAAAGTGGAGCTGAGCTTCAGGCTTTGGAGGATGAGTGGCTGTCAAAGGCACAGTTGAAGACTCTCTCAGAAGCAGTTGTGGAGGCAATTGAGAGGCAGAACATTGGAGAGGAAGAGAAAAGAAGGAAGTTGAATGAGTGGATGCACCATTCAAGTATTGAAAGGTGTCTTTCAAATGAGGAGGGTAGGGAGATAGCTGAAAAGTTAGGAGTGAGGAACCTCTTTTGGGACTGGGACTTGCCTAGGACTAGAGAAGGGTTTTACAGGTTCAAAGGGTCAGTAACTGCATCAATTGTTAGAGGTTGGGCTTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGCCCCAATGTGGCTGAGTGCACACAGTTTGCTGAGGGGGTTAGATCAAAGCACCCTCAGATGATGCTGGGGTACAACCTCTCTCCATCTTTCAACTGGGATGCTTCTGGCATGACTGATGAGCAAATGAGGGACTTCATTCCCAAGATTGCAAAGTTGGGGTATGTGTGGCAATTCATCACAGTGGGAGGGCTGCATTCTAATGCACTCATTACCTCAACATTTGCAAGGGATTTTGCCAATAGGGGAATGCTGGCCTATGTGGAGAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGATAGGTACCTCAAGACTGTCCAGGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGAGTAACTGAAGAGCAGTTTAAAGAATCATGGACTAGGCCAGGAGCTGTAGACATTAATAGAGGCAGTATCGTGGTTGCTAAGGCCAGAATGTGA 1725 0.4817 MLMQVIHEQIVDEEARFEAEVAEVQAWWNSERFRLTKRPYTARDVVSLRGNLRQTYASNEMAKKLWRILKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTSNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMNMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPNLRGKSLATLMAQGMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIERQNIGEEEKRRKLNEWMHHSSIERCLSNEEGREIAEKLGVRNLFWDWDLPRTREGFYRFKGSVTASIVRGWAFAPHADVIWMETASPNVAECTQFAEGVRSKHPQMMLGYNLSPSFNWDASGMTDEQMRDFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKESWTRPGAVDINRGSIVVAKARM 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01189 574 CDD ICL_PEPM 65 256 IPR039556 GO:0003824
Pumo11g01189 574 Pfam Isocitrate lyase family 20 550 IPR006254 GO:0004451|GO:0019752
Pumo11g01189 574 Gene3D - 16 534 IPR040442 -
Pumo11g01189 574 ProSitePatterns Isocitrate lyase signature. 210 215 IPR018523 GO:0003824
Pumo11g01189 574 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 555 IPR006254 GO:0004451|GO:0019752
Pumo11g01189 574 PIRSF ICL 11 295 IPR006254 GO:0004451|GO:0019752
Pumo11g01189 574 PIRSF ICL 367 553 IPR006254 GO:0004451|GO:0019752
Pumo11g01189 574 NCBIfam isocitrate lyase 21 550 IPR006254 GO:0004451|GO:0019752
Pumo11g01189 574 Gene3D - 261 376 - -
Pumo11g01189 574 FunFam Isocitrate lyase 261 376 - -
Pumo11g01189 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 10 534 IPR015813 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01189 K01637 - gmx:100782793 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01189 11 41230006 41232341 Pumo11g01189 11 41230006 41232341 ECH