Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo11g01186 | ATGTGTAATGCCATGAAGGTGGTGGTGGAGAATTTGACAGGAACACTTTTCTACATTCAAGTGGGCAATGATGCCACGGTCGAAGATCTAAAGAGGGAAATCGAGGCTCAACAAAAGCTCCCTAGTGATCGTTTGATCCTTGTTCTTGATGCTGATCATTGCCCTTTAATGAGCAAAGAAGAAGAAAAGGCATCTCTGATTGAGTGTGGAATCCAAGATGGATCCCATATTTACCTTTTCTTCAATCCAATTGATGATGATTCTAATGATCATTTCATGTTTACTTGGCCAGATTTCCATCTTGGTTAG | 309 | 0.4045 | MCNAMKVVVENLTGTLFYIQVGNDATVEDLKREIEAQQKLPSDRLILVLDADHCPLMSKEEEKASLIECGIQDGSHIYLFFNPIDDDSNDHFMFTWPDFHLG | 102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo11g01186 | 102 | ProSiteProfiles | Ubiquitin domain profile. | 5 | 79 | IPR000626 | GO:0005515 | |
| Pumo11g01186 | 102 | Gene3D | - | 3 | 81 | - | - | |
| Pumo11g01186 | 102 | Pfam | Ubiquitin family | 8 | 82 | IPR000626 | GO:0005515 | |
| Pumo11g01186 | 102 | SUPERFAMILY | Ubiquitin-like | 3 | 83 | IPR029071 | - | |
| Pumo11g01186 | 102 | PANTHER | UV EXCISION REPAIR PROTEIN RAD23 | 5 | 86 | - | - | |
| Pumo11g01186 | 102 | CDD | Ubl_ubiquitin_like | 7 | 80 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo11g01186 | - | - | lja:Lj3g3v2900800.1 | 169.088 |