Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01182 ATGTTCCAGCGAAGAAAAAAGGAACACAGTTTTAGTACCTTGCCAGTTTCCACCACCTCAGACTCAGACACAACAGCAATGCCTCCTCTTCCTATAATCAGAACCAAAACACCTTCATTCAAATCCTTCCTCTTAACCCTCTCTCTCCTCCTCAACCTCTACCTCCTCTTCCTCCTGTGGGTCCCATCCAACACATCATTACCCCAAACAACCACTCTCATCTCCCGGTTCTCCCCCACCACGAGCCGCCACGTCCTCTTCGCCGTCGCCTCCTCCTCCCTCTCCTGGCCCCGCCGCCTCCCCTATTTAAACCTCTGGTACTCCCCCGCCACCACCCGCGCCGTAGCATTCCTCGACAAGCCACCGCCTCCGAACACCACCTCCACCGCCTCCGCCTCCTCCTCCTCGCCGCCGGTGGTGATCTCCGGCGACACCTCCTCCTTCCCCTACACGTTCCGCGGCGGGCTGCGGTCCGCGATCCGCGTGGCGCGCGCGGTGAAGGAGGCCGTGGATCGCAACGAGACGGACGTGCGGTGGTTCGTGTTCGGCGACGACGACACCGTGTTCTTCGTCGACAACGTGGTGCGGGCGCTGGCGAGGTACGACCACCGGCGGTGGCTCTACGTCGGGAGCAACTCCGAGAGCTACGAGCAGAACGTGAAGTACTCCTTCGAGATGGCGTTCGGAGGTGGCGGCTTCGCGATCAGCTCCTCGCTCGCTAGGGTTTTGGCGAGGGTTTTGGATTCCTGTTTGAGGAGGTATGGCCACTTGTATGGCAGCGATTCGAGGATTTATTCTTGCGTTGCTGAGCTTGGTGTTGGCTTGACTCATGAACCTGGCTTTCATCAGTTAGATATGCGGGGGAATTTGTTTGGGATGCTGGCTGCACATCCATTATCTCCTTTGTTGTCCCTTCATCACTTGGATGCAGTGGAGCCCCTTTTTCCTGACATGGACAGAGTACAAGCTTTGAAACATCTTATAGCAGCTGCAAATGTAGATCCTGCCAGGATCCTGCAGCAAACTGTCTGCTATGATCGATCAAATTCTTTGACTTTCTCCATTTCTTGGGGTTTTGCTATCCAGGTTTATCAAGGAAATGAACTTCTACCTGATCTCCTTTCACTGCAGAGAACTTTTGTGCCATGGAGGAGGGGTAGTAAAGTCAATGCCAATTTTATGTTTAACACCAGAGACTATCCCAGATATCCTTGTAAAAGACCTTCTGTATTTTTTTTAAAAAGTGTTACATCTGATAAAAGGGGCATTTGGAGCAATTACAGTACGCATGTTGTTGGGAACTGCTTTGAATCAAATGCTACACAGCTCAAGCAGATCATAGTTTTTTCAAGGAAGCTGGAGCTTAATAATGAACAGATGAATGCCCCCCGTCGTCAGTGCTGCAATGTTTTGCCGACTTCTAATGATACAGTCAGTCTTCATATTAGACAGTGTGAAATCGATGAACTGATCTCCATGCAACCCTAG 1488 0.5181 MFQRRKKEHSFSTLPVSTTSDSDTTAMPPLPIIRTKTPSFKSFLLTLSLLLNLYLLFLLWVPSNTSLPQTTTLISRFSPTTSRHVLFAVASSSLSWPRRLPYLNLWYSPATTRAVAFLDKPPPPNTTSTASASSSSPPVVISGDTSSFPYTFRGGLRSAIRVARAVKEAVDRNETDVRWFVFGDDDTVFFVDNVVRALARYDHRRWLYVGSNSESYEQNVKYSFEMAFGGGGFAISSSLARVLARVLDSCLRRYGHLYGSDSRIYSCVAELGVGLTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLDAVEPLFPDMDRVQALKHLIAAANVDPARILQQTVCYDRSNSLTFSISWGFAIQVYQGNELLPDLLSLQRTFVPWRRGSKVNANFMFNTRDYPRYPCKRPSVFFLKSVTSDKRGIWSNYSTHVVGNCFESNATQLKQIIVFSRKLELNNEQMNAPRRQCCNVLPTSNDTVSLHIRQCEIDELISMQP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01182 495 Pfam Protein of unknown function, DUF604 218 468 IPR006740 -
Pumo11g01182 495 PANTHER FRINGE-RELATED 44 491 - -
Pumo11g01182 495 Gene3D - 75 309 - -
Pumo11g01182 495 MobiDBLite consensus disorder prediction 118 140 - -
Pumo11g01182 495 MobiDBLite consensus disorder prediction 122 140 - -
Pumo11g01182 495 MobiDBLite consensus disorder prediction 1 24 - -
Pumo11g01182 495 FunFam Fringe-related protein 74 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01182 Pumo-Chr11 41118033 41122582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01182 80 494 Glycosyltransferase AT4G15240 63.549 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01182 - - gmx:100813277 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01182 11 41118033 41122582 Pumo11g01182 11 41118033 41122582 ECH