Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01181 ATGCAGCTTTTTCACAAACCCACCAAGGGTCAGTCTCTGGTTAATTTCATCTTGGTATCTTCTTCATTCTGTGCCCTTTATCTCATTGTATCAGTGCTGCTTTTGGGGCCTTCAAAGCTGGTTCATGTGAACAAGTCATCACAAGATGTGTCCACACCAACCACCCTTGATCACCTTGTGTTTGGAATTGCTTCAAGCTATAGTTCGTGGGGAAAGAGGAAGGAGTACTTGAAGCTGTGGTGGAACAACAGCACCAACAAAGCAATGAAGGGGTGTGTGTTTTTGGATAGTCTCTCAGATGAAGACATTAATGCTAGGAATGAGAATGGTACTTCTCTTCCTCCTCTTTGTGTCTCTCAAGACACTTCACGGTTTCGTTTCACTCACAAGGGTGGACTTCGCTCGGCAATTCGCGTGGCACGTGTCGTTGCCGAGACTGTGGCACTGAACAATGATTCGGACGTGAGGTGGTATGTGTTTGGAGATGATGACACGGTTTTCTTCCCGGAGAATGTGGTGAAGACTCTTTCCAAGTATGATCATGAGCTTTGGTACTACATTGGTGCACACTCTGAGGTTTATGAGCAGAACCGGGTGTTTGGTTTTGGAATGGCTTTTGGGGGTGCAGGTTTTGCTATCAGCTCCTCTCTGGCAAAGGTCTTGGCCAGGGTTTTTGATTCTTGTATTGAAAGGTACCCTCATCTCTATGGAAGTGATGGCAGAGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACACATGAACCCGGTTTTCACCAGGTGGATTTAAAGGGAAATACCTTTGGCTTATTGGCGGCACATCCTTTAACTCCTTTGTTGTCCCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAACATGACAACTATACAAGCTCTGAAGCATTTATTTGAAGCTGTAAATGTTGATTCCCAGAGGATGCTGCAACAAGCAATATGCTATGACAGATGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCTGTTCAGGTTTTCCCAAACCATATGCTTTTGCCAGATGTTCTGAAGGTGCAAGAGACATTCAAGCAGTGGAAGAAGGGAAGCATGTTGGCAAAATCATACACTTTCAACACAAGAGAACTTCACCCTGACCCTTGTAAAAGATCCACCGTTTTCTTTCTAGACAATGTGTCTTCTGGCAAGGATGGCATCATTAGCAGTTACAAGAAATCTTTTCAAAATTGCTCAAACGATGCCGTGTCCCCGCAGAAACTGGAAGTGATCAAAGTGGTCACAAATAAGCTAGACCTTGACATCAAACAGTTGCATGCTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACTGCCCGGGACCAAATGGAAATTGCAATCAGGGTATGCAAAGATGAAGAATTGGTTTACATGCACTGA 1425 0.4463 MQLFHKPTKGQSLVNFILVSSSFCALYLIVSVLLLGPSKLVHVNKSSQDVSTPTTLDHLVFGIASSYSSWGKRKEYLKLWWNNSTNKAMKGCVFLDSLSDEDINARNENGTSLPPLCVSQDTSRFRFTHKGGLRSAIRVARVVAETVALNNDSDVRWYVFGDDDTVFFPENVVKTLSKYDHELWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLARVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGLLAAHPLTPLLSLHHPDYTDPIFPNMTTIQALKHLFEAVNVDSQRMLQQAICYDRWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWKKGSMLAKSYTFNTRELHPDPCKRSTVFFLDNVSSGKDGIISSYKKSFQNCSNDAVSPQKLEVIKVVTNKLDLDIKQLHAPRRHCCDVLPSTARDQMEIAIRVCKDEELVYMH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01181 474 FunFam Fringe-related protein-like 46 310 - -
Pumo11g01181 474 Gene3D - 46 318 - -
Pumo11g01181 474 PANTHER FRINGE-RELATED 19 469 - -
Pumo11g01181 474 Pfam Protein of unknown function, DUF604 196 447 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01181 Pumo-Chr11 41114837 41117278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01181 13 439 Glycosyltransferase AT1G05280 54.023 2.14e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01181 - - gmx:100813816 878.241