Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01119 ATGGCTTCCCAGCACCAAAACGGGTCGAATATTGACCCGAATCATATTGGGGTGGAAACAACAATGGCTTCCGACCACGAAAACAGGTCGGAAATTGACCCGAACACTATTGGGGTGGAGACAGCAATGGCTTCCCAGCACAAAAACGGGTCGGAAATTGGCGCGAACCCTATTGGGGTGGAGGCCCAGGAAGCGGAGGCTGAAAAGTTTGGAACTTTGGGTAGTGCTGTTCCTATTGAGGAAGGCGTGGAGAAGATCAATTTGTTGGGTTCCTCTCTTTTAGTTGAGGAGAGCGGTGATAAGGATGAGAGTGAGAGTGAGAGTGAGAGTGAAAGTGAAAGTGAAAGTGGAAGTGAGAGTGAAAGTGGAAGTGGAAGTGGAAGTGAAAATTCAGAGTCTGAGAGTCCTTCTTCTGATTCTGGTAGCGGAAGTAGTAGTAGCAGTAGTGAAAGCGAGGGTGATGATGATGATGATGGTGATAAAGATGATGACGTGGAAGTTGAAGAAGGCGAGATAAGTGGTTCTGATGAAGATGAAGAGGAAACGGTTAGTTGGAGCTTGGTTGATGAGGATGTTGATGATGAAGATGGTGATGGTGATGCGGGGGGAGGACCCATCAGGTCAAAGAACGAGCTTCAGAATCTGCCTCCTGTTCCTCCAGTCAATGCAACTTTAGAACCACACCATCAAACGTTGCCAGTGGGAATTGTTACATCGATTCTTGGTGCTCAAGTCATTGTGGAAGGAGTGGAGAAGCATGACCCTCTTAATGAGGGTTCTATTCTTTGGTTGACTGAAAGCCGAAAACCACTAGGTTTAATTGATGAAATCTTTGGACCTGTCAAGAACCCTTATTATATTGTGAGATACAATTCTGAAAGTGAAGTCCCTGCGGGGATCCATGGGGGAACCTTGATCTCATTTGTTCCAGAATTTGCTGATCATGTGCTTAATAACAAGGGTCTTTATAAGAAAGGGTACGATGCATCTGGTGCAAATGACGAAGAGTTGTCTGATGAAATGGAGTTTTCAGATGATGAGAAAGAGGCTGAATACAAGAGAATGCAAAGGACGACAAAGAGAGGCGCAAACGATCAAAATCATGGCAAGAAAAAAAACAACCGAAAGAAATTTTCACCAAAAGAGCATGCTGCACCTGCTGCACCATTGCTTGGTCATGGAAATTGTCCTCCTTTTTCAGGCATTGGACAAGGTCTTTTGGGGGGAACTACCCCAGTTCCATCATTTCCACCCTTAAACACAGCGCCTAACTTTGCTACAAATGGAGTTTGGACAAACGGAACATCATTTCCACAGCAGCCACAGACTGCCATGCTTCCTAATGGATTTCCCACAAATGGCATGTCATGGTACCCACAAAACACTCAAATTTCTCCTCAGTTGCCTATGCCAGGACTTCCATTTCAACAGCAATTACATCCCAACCAGGGATCTCTTCCCACAGCTATGCTACCTGGGATGCAACCCAATATGTTTGCTCAATCCCTATATGCAGCAGGACTTGTTGGTCAAAATCAAATGGCATTTGGGATGGGTTCACCCTTCCCACAGATGCAGCCCCCTATTTCTGCTCCACAACAGGGTTTTCCATCCATTGAATTTCAGTCAGAAAGAAACCTTAATTTGCATTCTAATACTGTTTCTGGCGCCCCCCCTCAATTCCATCCACGTCCAAATGCTAATCGTGGGAGAAAAACATTTCATGGTGCAGGTAGGAAAGGGTGGCGACCACCCAAGTGA 1761 0.4566 MASQHQNGSNIDPNHIGVETTMASDHENRSEIDPNTIGVETAMASQHKNGSEIGANPIGVEAQEAEAEKFGTLGSAVPIEEGVEKINLLGSSLLVEESGDKDESESESESESESESGSESESGSGSGSENSESESPSSDSGSGSSSSSSESEGDDDDDGDKDDDVEVEEGEISGSDEDEEETVSWSLVDEDVDDEDGDGDAGGGPIRSKNELQNLPPVPPVNATLEPHHQTLPVGIVTSILGAQVIVEGVEKHDPLNEGSILWLTESRKPLGLIDEIFGPVKNPYYIVRYNSESEVPAGIHGGTLISFVPEFADHVLNNKGLYKKGYDASGANDEELSDEMEFSDDEKEAEYKRMQRTTKRGANDQNHGKKKNNRKKFSPKEHAAPAAPLLGHGNCPPFSGIGQGLLGGTTPVPSFPPLNTAPNFATNGVWTNGTSFPQQPQTAMLPNGFPTNGMSWYPQNTQISPQLPMPGLPFQQQLHPNQGSLPTAMLPGMQPNMFAQSLYAAGLVGQNQMAFGMGSPFPQMQPPISAPQQGFPSIEFQSERNLNLHSNTVSGAPPQFHPRPNANRGRKTFHGAGRKGWRPPK 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01119 586 MobiDBLite consensus disorder prediction 90 220 - -
Pumo11g01119 586 Pfam Gar1/Naf1 RNA binding region 233 298 IPR007504 GO:0001522|GO:0042254
Pumo11g01119 586 MobiDBLite consensus disorder prediction 328 396 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 150 199 - -
Pumo11g01119 586 Gene3D Probable tRNA pseudouridine synthase domain 203 308 IPR038664 -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 1 21 - -
Pumo11g01119 586 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 203 309 - -
Pumo11g01119 586 SUPERFAMILY Translation proteins 233 294 IPR009000 -
Pumo11g01119 586 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 10 534 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Pumo11g01119 586 MobiDBLite consensus disorder prediction 544 559 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 544 586 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 100 116 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 347 369 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 1 35 - -
Pumo11g01119 586 MobiDBLite consensus disorder prediction 117 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01119 K14763 - gmx:102660668 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01119 11 39718910 39721559 Pumo11g01119 11 39718910 39721559 ECH