Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01118 ATGAGTCGCTACGATCCCAATCCCTTCGACGAAGAACCGCTCGAGGTTAATCCATTCGCGGATGGAGCAGCTAAAGGAAAAGGGTCAGGGCAACCAAGTTATAGTGGAGGTGCATTTTATACTACTAACACTGGAAGTGTTCCCTCAGCAAACTCAAGGCTCTCACCCCTTCCTCCAGAGCCTTATGATCGTGGGGCAACTATTGACATCCCTCTTGATAATTCAAAGGACGTAAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTAAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTTCAAAGGATCCAGTACATTGCATTTACAACATGGTTGGGTTTAGTTCTGTGTCTTTTATGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCAATTATCTATTTTATCTCTGGTGCTCCAGGATCTTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACAGACAGTGCTCTGAAATTTGGCTGGTTTTTCTTGGTTTACATGTTGCACATTGCCTTCTGCATTTTCGCCGCTGTTGCTCCCCCAATTATCTTCAAAGGAAAATCTCTCACAGGTGTTTTGGCCGCGATTGACGTGTTGGGCGACAATGCATTGGTTGGGATATTCTACTTCATTGGGTTTGGCTTTTTCTGTCTCGAGTCAGTGCTGAGCATCTGGGTTATACAGCAAGTATATATGTACTTCCGTGGCAGTGGCAAGGCTGCAGTTTTAAAGCGTGAGGCTGCGAGGGGGACAATGATGGCAGCTCTATGA 921 0.443 MSRYDPNPFDEEPLEVNPFADGAAKGKGSGQPSYSGGAFYTTNTGSVPSANSRLSPLPPEPYDRGATIDIPLDNSKDVKAKEKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLVYMLHIAFCIFAAVAPPIIFKGKSLTGVLAAIDVLGDNALVGIFYFIGFGFFCLESVLSIWVIQQVYMYFRGSGKAAVLKREAARGTMMAAL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01118 306 Pfam SCAMP family 115 286 IPR007273 GO:0015031|GO:0016020
Pumo11g01118 306 MobiDBLite consensus disorder prediction 34 53 - -
Pumo11g01118 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 303 IPR007273 GO:0015031|GO:0016020
Pumo11g01118 306 MobiDBLite consensus disorder prediction 1 70 - -
Pumo11g01118 306 Coils Coil 75 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01118 Pumo-Chr11 39690341 39697246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01118 2 278 Miscellaneous Gene Families AT1G61250 71.174 8.16e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01118 K19995 - gmx:100796729 575.474