Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01071 ATGTTGCAGAAGGTGTGCAAGAGATACAGAATCATGGTGGGTGGAAATGGTTTGTTTTACCCCGTTGTGGGGTTTGCATCGATCGTGTTGTTCATATACATGTCTTTTGGGGACGTGAGGTTTGGTTTTGTGGAAGAACCGGAATTGGCTTTTGTGGAGAGAAATGGGACTCATTTTATGGTGGATGGGAAGGCTTTCTACATTAATGGGTGGAACTCTTATTGGTTAATGGTGCAGTCTGTGGATGAGTATTCCAGGCCAAAGGTACGTGAAATGCTAAGGGCTGGGGCCAAGATGGGGCTCACTGTGTGTAGAACTTGGGCCTTCAATGATGGTGACTACAATGCCCTTCAGAGTTCCCCTGGTGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTAGGCTGCTCCTTAGCTTAGTAAATAACTTGCACGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGGGTAGGGTTAAGCTCGTCTAACGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTACGTCAAGACAATTCTGACAAGGAAGAATACTATAACTGGAATTGAATATAGAAATGACCCCACCATTTTTGGTTGGGAATTGATTAATGAACCTCGGTGCATAACTGATCCTTCTGGTGATACTCTCCAAGATTGGTTAGAGGAAATGTCAGCTTTTGTCAAATTGATTGACAAGCGCCATCTTGTGACTATTGGGCTTGAAGGTTTCTATGGTCCTAATGATCCAAAAAGATTGACTGTGAACCCTGAGGATTGGGCATCTAGACTTGGATCTGACTTTATAAGGAATTCCAAAATCTCAAATATTGACTTCACCTCTGTCCATATCTATCCTGATCACTGGTTTCATGAGCAGGTATTTGAAGACTATATGAAATTTGTCTCCAAGTGGATGCTTTCTCACATTGAAGATGGTGATAAGGTATTGAACAAGCCAGTCGTGTTCTCTGAATATGGATTATCAGACATAAATTTTACGATGTCTGAACGAAAAACGATGTACAAAACAATTTTAGACATAAGCTACAAATCTGCAAAGAAAAACAGGTCTGGAGCAGGTGCTCTAGTTTGGCAATTCTTAGTTGGAGGAATGCAGGAGTTTACTGATGATTTTGGGATCATACCATGGGAAAAGTCACCAATCCCTTCACTATTTGTTGAACAATCATGCAGATTAGCCAAGGTCCAGGGATGGCCTCACAAGGACACAAGTTTTAAACAATTTTGTTAG 1311 0.4127 MLQKVCKRYRIMVGGNGLFYPVVGFASIVLFIYMSFGDVRFGFVEEPELAFVERNGTHFMVDGKAFYINGWNSYWLMVQSVDEYSRPKVREMLRAGAKMGLTVCRTWAFNDGDYNALQSSPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCITDPSGDTLQDWLEEMSAFVKLIDKRHLVTIGLEGFYGPNDPKRLTVNPEDWASRLGSDFIRNSKISNIDFTSVHIYPDHWFHEQVFEDYMKFVSKWMLSHIEDGDKVLNKPVVFSEYGLSDINFTMSERKTMYKTILDISYKSAKKNRSGAGALVWQFLVGGMQEFTDDFGIIPWEKSPIPSLFVEQSCRLAKVQGWPHKDTSFKQFC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01071 436 PANTHER - 20 428 IPR045053 GO:0004553
Pumo11g01071 436 FunFam Mannan endo-1,4-beta-mannosidase 6 48 423 - -
Pumo11g01071 436 Pfam Cellulase (glycosyl hydrolase family 5) 84 385 IPR001547 GO:0004553|GO:0071704
Pumo11g01071 436 SUPERFAMILY (Trans)glycosidases 51 414 IPR017853 -
Pumo11g01071 436 Gene3D Glycosidases 48 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01071 Pumo-Chr11 38846439 38850947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01071 15 436 Glycoside Hydrolase AT2G20680 69.104 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01071 K19355 - gmx:100811461 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01071 11 38846439 38850947 Pumo11g01071 11 38846439 38850947 ECH