Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01056 ATGGACAACTTCGAAGATGTTACAGAGCCAGTGAGTCCAAGTGGACGATACTTCAACACCACAGTGCTATGTGCATATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTATCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCATCAATCCTCACTTCTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACATTAAGATTCCAACATTCCCCGAAAACGAGTCATTATATGACCAATATTTTGATGACTATGTGTCAAGGATTTTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTCCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAAAGAGCTGATGATCCTTCTCTTCCTCTTTCATTTCCGTCGCGAAAACCCTCAGCATCACCACCTTCCAAGAAGGGTTTCTTCAAGTGGTTCCCTTCAACCGTGTTCTCCTTTTTCAACTCTATTTCAGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGACAAGACACCCGTAAGGAGTGGTGAGGAGGGTGTTGAGTCCCTGCCTTGTGTCATATCAAACATATCCTTCGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTTGGAGTGACAATAAACGATGTGATTACTGGGGTAATTTTTTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGGAAAGCAAATTCCACGGGATTGGTGATGCTTAGTACTAGGAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAGTCTCCATGGGGGAATCATATTTCTTTCTTACATGTACCCATACCCAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAGGTTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACATGAGGCTGTGGCCAAACATATCTATGGGACACTGAGAAACTCAAGTGTTGTGGTATCCAACTTGATTGGACCAATAGAACCTATGGTTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACGGGTGGACCCGAGAGTATAAATATTGCAGTTATAAGCTATACAAGAACGTTAAGAATTACCTTGAAAACACATAAAGGCTTTATTGATGAGAAGAAGTTCAAATTATGCGTGGTGAAAGCCTTTGAGGTCATATCCAAAGCAGCAATGGAGATTCCCAACAAAAGCAAAGGTTAA 1404 0.406 MDNFEDVTEPVSPSGRYFNTTVLCAYVFGFLESEVPIELSQAKYLFEDVFLPINPHFSSIMVRDEEGEMKWKRVEVKFEDHIKIPTFPENESLYDQYFDDYVSRILMERTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKPSASPPSKKGFFKWFPSTVFSFFNSISDFGWSIVKSSIVEDDKTPVRSGEEGVESLPCVISNISFDLDQVKKIKSKLGVTINDVITGVIFYGIRLYMQEIDNKAGKANSTGLVMLSTRNIGSYQSIQEMMKADSKSPWGNHISFLHVPIPKLSQASLSNPLEFVWKAQKIIKRKRGSFTVFLIEWLLDMELKLRGHEAVAKHIYGTLRNSSVVVSNLIGPIEPMVLANHPVKGLYFTMTGGPESINIAVISYTRTLRITLKTHKGFIDEKKFKLCVVKAFEVISKAAMEIPNKSKG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01056 467 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 8 461 IPR045034 GO:0008374|GO:0045017
Pumo11g01056 467 Pfam WS/DGAT C-terminal domain 309 454 IPR009721 -
Pumo11g01056 467 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 97 256 IPR004255 GO:0004144|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01056 Pumo-Chr11 38622043 38626028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01056 9 460 Acyl Lipid Metabolism Gene Families AT5G53390 26.483 4.87e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01056 - - gmx:100816273 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01056 11 38622043 38626028 Pumo11g01056 11 38622043 38626028 ECH