Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01014 ATGATGACAACTACAACATTAACCTACGCTATCTTCAATCTTCTTATCTTGTGCAATACATGGATAAGTACAAGTGCAAGTGAATGTCCTCCAATACACAAGAATAATTCATCCAACCTAGAAGCCATGAAGGTGAGGTTTGAAAGATGGCTTAAACAAAATGGTCGAAATTACAAAGACAAAGAACAATGGGAAGTTCGTTTTGGCATTTACCAAGCAAATGTTGAGTTCATAGAGTGCAAAAACTCTCAAAAGAACTCCTACAATCTCACAGACAACAAATTTGCAGATCTTACTAATGAAGAGTTTGTAAGTACTTATCTGGGTTTTGGAACTAGGTTGCTTCCACTTACAGGATTCATGTATCATGAACATGGGGATCTTCCAGAAAGCAAGGATTGGAGGAAGGAAGGAGCAGTAACTGACATCAAGGATCAAGGCCAATGTGGAAGTTGTTGGGCATTCTCTGCAGTGGCTGCTGTGGAAGGCATCAACAAAATAAAGTCAGGGGAGTTGGTTTCTCTCTCTGAACAAGAACTCATAGACTGTGATGTTGAAGATGGAAACCAAGGCTGTGAAGGTGGCTTAATGGACACAGCATTTGCATTCATCAAAAAGAATGGTGGACTAACCACTACAAAAGACTACCCTTATGAAGGGGTAGATGGCACATGCAACAAGGAAAAAGCTGGACATCATGCAGTCAATATAAGTGGGTATGAAAGAGTACCTGCCAATGATGAGGCTATGCTTAAAGCTGCAGCTGCTAATCAACCTGTCTCAGTGGCAATTGATGCTGGAGGTTTAGCATTTCAGCTTTATTCAGAAGGTGTTTTCTCTGGCATTTGTGGAAAGCAACTCAATCATGGTGTGACTATAGTTGGGTACGGAGAAGGAACTTTTGATAAGTATTGGATTGTGAAGAACTCATGGGGTGCTGACTGGGGTGAATCTGGTTATATTAGGATGAAACGTGACACTTTTGATAAAGCTGGTACTTGTGGCATTGCCATGCAAGCCAGTTACCCTCTCAAGAATTGA 1041 0.4102 MMTTTTLTYAIFNLLILCNTWISTSASECPPIHKNNSSNLEAMKVRFERWLKQNGRNYKDKEQWEVRFGIYQANVEFIECKNSQKNSYNLTDNKFADLTNEEFVSTYLGFGTRLLPLTGFMYHEHGDLPESKDWRKEGAVTDIKDQGQCGSCWAFSAVAAVEGINKIKSGELVSLSEQELIDCDVEDGNQGCEGGLMDTAFAFIKKNGGLTTTKDYPYEGVDGTCNKEKAGHHAVNISGYERVPANDEAMLKAAAANQPVSVAIDAGGLAFQLYSEGVFSGICGKQLNHGVTIVGYGEGTFDKYWIVKNSWGADWGESGYIRMKRDTFDKAGTCGIAMQASYPLKN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01014 346 Gene3D Cysteine proteinases 31 346 - -
Pumo11g01014 346 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 38 338 IPR013128 GO:0008234
Pumo11g01014 346 SUPERFAMILY Cysteine proteinases 43 344 IPR038765 -
Pumo11g01014 346 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Pumo11g01014 346 SMART pept_c1 128 344 IPR000668 GO:0006508|GO:0008234
Pumo11g01014 346 Pfam Papain family cysteine protease 128 343 IPR000668 GO:0006508|GO:0008234
Pumo11g01014 346 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 304 323 IPR025661 -
Pumo11g01014 346 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Pumo11g01014 346 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Pumo11g01014 346 PRINTS Papain cysteine protease (C1) family signature 304 310 IPR000668 GO:0006508|GO:0008234
Pumo11g01014 346 CDD Peptidase_C1A 129 343 IPR039417 -
Pumo11g01014 346 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 146 157 IPR000169 -
Pumo11g01014 346 FunFam Senescence-specific cysteine protease SAG39 28 345 - -
Pumo11g01014 346 SMART Inhibitor_I29_2 47 103 IPR013201 -
Pumo11g01014 346 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01014 Pumo-Chr11 37917133 37918625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01014 - - gmx:121173133 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01014 11 37917133 37918625 Pumo11g01014 11 37917133 37918625 ECH