Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00900 ATGCCTCCCGTCGCTCCTCGATCCGGCGATGCCATATTCGCCAACGTCGAACGCGTTAATGCGGAGCTGTTTACTTTGACGTATGGCGCAATTGTGCGTCAATTGCTCACGGATCTGGAAGAGGTTGAGGAGGTTAACAAGCAGCTTGATCAAATGGGTTACAATATTGGAATCCGTTTGATTGATGAGTTTTTAGCTAAGTCTAATGTCTCCAGATGCAACGATTTCAGAGAGACTACTGATGTAATTGCAAAGGTTGGTTTTAAAATGTTCCTTGGTGTTACTGCATCTGTGACCAATTGGGATGCTGATGGGACATGTTGTAGTATTGTTTTGGAGGATAATCCTTTGGTAGATTTTGTTGAGCTTCCTGACAACTGCCAAGGTCTGTACTATTGCAACATCTTAAGTGGAGTCATTAGAGGAGCCTTAGATATGGTGTCAATGAAGACTGAGGTAACTTGGCTCCGCGACGTGCTTCGAGGTGATGATGTGTTTGAGTTGCAGGTGAAACTTCTCAAGCACGTTCCAGAAGAGTATCCATACAAGGATGATGAGTGA 561 0.4439 MPPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKHVPEEYPYKDDE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00900 186 Pfam Transport protein particle (TRAPP) component 24 171 IPR007194 -
Pumo11g00900 186 FunFam Trafficking protein particle complex subunit 4 185 - -
Pumo11g00900 186 Gene3D Trafficking protein particle complex subunit 3 4 185 - -
Pumo11g00900 186 CDD TRAPPC3_bet3 20 174 IPR016721 GO:0030008|GO:0048193
Pumo11g00900 186 PIRSF TRAPP_1_Bet3 4 185 IPR016721 GO:0030008|GO:0048193
Pumo11g00900 186 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 176 IPR024096 -
Pumo11g00900 186 Coils Coil 32 52 - -
Pumo11g00900 186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 7 185 IPR016721 GO:0030008|GO:0048193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00900 K20302 - gmx:100306217 376.711