Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00768 ATGGAGAGAGGATACATATGTAGAGTACGAATTAGTAATTATCCATCATTGAGTTCAGATCCAACCACTTTGTTTATGAAAGAAACAGTGCCAAAATCAATGGAAAGCTTTGAAATGCTTGGTTTATGCCTTTTGTTCCTCTCATTGATAACCATGTCTTCCACATCGGACATGATTACTCCAACTCAACCCATCAGAGATGGTAAGAATGAGAATAGAACTCTGGTTTCAGCAAATGGAACCTTTGAAGCAGGATTCTTCAGCCCAGAAAATTTGAATAGCCGCTACCTTGGAATTTGGTACAAACACATATCCCCCAGAACAGTTGTTTGGGTAGCCAACAAAGAAGCACCCCTTAAAGACCACTCTGGAGTCTTGGAAGTAGACAGTGATCAAGGCATTCTTAGAATCAATGATGGTACAGGAGCCACAATATGGTCCTCAAATGTATCACACACACCAAACAAACAAGTTGTGGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGAACATAACAACCCTTTGTGGCAAAGCTTTGATTGCCCTGGTGACACTTTACTTCCAGGAATGAAAATTGGAGTGAACTTCAAAACGGGTCAACATCGAGCTCTAAGATCTTCGAAATCCTGGGAGGATCCTACTCCAGGTAAATTTTCATTTGGTGTTGATATTCGTGGCCTTCCTCAATTAGTTATCACAAAGGAGGATAGTAATAATGACATAGTTTATAGACCAGGGTCATGGAATGGTCTAAGTATCACAGGACTCCCTGGAGAAATAACTGACCAATTTACTAAATCCTTTTTTGTGATGAATCAAGATGAGTTCTTCTATGAGATTCAACTCTTGAATAGTTCAACTAAACTGAGAAGCAGATTGGGCCCAGATGGGTATCGAATACGTTTAATATGGTCAGATCATTATAATAAATGGGATATTCACTATCCTGGACCATTTGATGTGTGTGAGACATATGCCTTGTGTGGTGCAAATACTATTTGCGATGTCAGTGAGAAAGCTCAACACTGTGAATGCTTGAGCGGATTCAAAGCCAACTCTGCAGATTCAACTTGTGCTCGAACTACCCCTCTAGATTGTAACAAGGGAGATAAAGATAAGTTTCAGAAGTATGAGGGAATGAAATTGCCTGACACATCTTCATCTTGGTATGATAGGACAATTAGTCTTCAGAAATGTGAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCATATGCTCAATTGAATATCAGTGGCGAGGGAAGTGGATGCTTGCATTGGTTTTCTGACATTGTTGATATCAGGACACTCCCACAGGGTGGACAAGATTTTTATTTGCGAATGCCTACAGTTACAGCTTCGGAGTTACAATTACAAGATCACCGCTTCAACAGGAAGAAATTAGCCGGAATTGTGGTTGGCTGTACTATATTCATCATTGCCATTACAGTATTCGGATTGATATTTTGCATTAGAAGGAATAAACTCAAGCAGTCAGAAACAAATTATTGA 1521 0.3971 MERGYICRVRISNYPSLSSDPTTLFMKETVPKSMESFEMLGLCLLFLSLITMSSTSDMITPTQPIRDGKNENRTLVSANGTFEAGFFSPENLNSRYLGIWYKHISPRTVVWVANKEAPLKDHSGVLEVDSDQGILRINDGTGATIWSSNVSHTPNKQVVVELLESGNMVVKDEHNNPLWQSFDCPGDTLLPGMKIGVNFKTGQHRALRSSKSWEDPTPGKFSFGVDIRGLPQLVITKEDSNNDIVYRPGSWNGLSITGLPGEITDQFTKSFFVMNQDEFFYEIQLLNSSTKLRSRLGPDGYRIRLIWSDHYNKWDIHYPGPFDVCETYALCGANTICDVSEKAQHCECLSGFKANSADSTCARTTPLDCNKGDKDKFQKYEGMKLPDTSSSWYDRTISLQKCEKLCLSNCSCTAYAQLNISGEGSGCLHWFSDIVDIRTLPQGGQDFYLRMPTVTASELQLQDHRFNRKKLAGIVVGCTIFIIAITVFGLIFCIRRNKLKQSETNY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00768 506 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 51 182 - -
Pumo11g00768 506 CDD PAN_AP_plant 365 452 - -
Pumo11g00768 506 Gene3D - 51 183 IPR036426 -
Pumo11g00768 506 SMART blect_4 66 185 IPR001480 -
Pumo11g00768 506 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 44 498 - -
Pumo11g00768 506 Pfam D-mannose binding lectin 108 211 IPR001480 -
Pumo11g00768 506 ProSiteProfiles Bulb-type lectin domain profile. 60 183 IPR001480 -
Pumo11g00768 506 Pfam S-locus glycoprotein domain 246 355 IPR000858 GO:0048544
Pumo11g00768 506 Gene3D Hepatocyte Growth Factor 368 449 - -
Pumo11g00768 506 SMART ntp_6 372 451 IPR003609 -
Pumo11g00768 506 CDD B_lectin 72 185 IPR001480 -
Pumo11g00768 506 ProSiteProfiles PAN/Apple domain profile. 369 452 IPR003609 -
Pumo11g00768 506 SUPERFAMILY alpha-D-mannose-specific plant lectins 109 211 IPR036426 -
Pumo11g00768 506 Pfam PAN-like domain 369 437 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00768 Pumo-Chr11 26576683 26581545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00768 - - gmx:100802416 811.601