Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00557 ATGCTTAACTTGGCCAACTTAGCTGAAGAGGTCCAAATTGCGCACCGCCGAAGGAACAAGTTGAAGAAAGGGGATTTTGCTGATGAGAGCAATGCCACCACTGAATCAGACATTGAAGAAACTCTCAAGAAACTTATGGTGGATATGAAGAAGTCTCCTCAGGAAGTCTTTGATGCACTGAAGAACCAGACTGTTGATCTTGTTCTTACTGCTCATCCTACTCAATCAGTCCGTAGATCTTTGCTTCAAAAGCATGGAAGGATAAGAAATAATCTAACTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAACTTGATGAGGCTCTACAAAGGGAGATCCAAGCTGCATTCCGTACTGATGAAATCAGGAGGACCCCTCCAACCCCACAAGATGAGATGAGAGCAGGGATGAGTTACTTCCATGAAACAATTTGGAAGGGTGTACCCACATTTCTACGTCGTGTTGATACAGCTTTGAAGAATATAGGGATCAATGAACGTGTCCCTTATAATGCTCCTCTCATTCAATTTTCTTCTTGGATGGGTGGAGATCGTGATGGCAATCCAAGAGTAACTCCTGAAGTGACCAGAGATGTTTGCTTACTGGCTAGAATGATGGCTGCTAATTTGTACTATTCCAAGATAGAGGATCTTATGTTTGAACTGTCAATGTGGCGCTGCAATGATGAGCTACGTGTCCGTGCAGATGAACTTCACAGGTCTTCCAAGAAAAATGCAGTTGCAAAACACTACATAGAATTTTGGAAAGTCATTCCTCCAACTGAACCATATCGTGTGCTACTGGGTGAAGTAAGGAATAGGCTTTACCAAACTCGAGAGCGCTCGCGCCATTTGCTAGCTCATGGCTACTCTGACATTCCAGAGGAAGAAACTTTCACCAATGTTGAGGAGTTCTTGGAACCCCTTGAACTGTGTTACAGATCACTCTGTGCTTGTGGCGACCGCGCAATTGCCGATGGAAGCCTTCTAGATTTCTTGAGGCAAGTGTCTACTTTCGGACTCTCCCTAGTGAGGCTCGACATAAGGCAAGAGTCCGACCGCCACACCGACGTCTTAGACGCCATCACCAAGCATTTGGAAATAGGCTCATACCAGGAATGGTCTGAGGAAAAACGGCAGCAATGGCTTTTATCCGAATTAAGTGGCAAACGGCCCCTGTTCGGCCCCGATCTTCCCCAAACCGAAGAAATCAGAGACGTCTTGGACACGTTCCATGTCATAGCAGAGCTTCCACCAGACAACTTTGGAGCATACATCATCTCAATGGCAACTGCACCATCTGATGTGCTTGCAGTCGAGCTTCTGCAGCGTGAATGTCATGTGAAGCAGCCACTGAGAGTCGTGCCATTGTTTGAGAAGCTGGCTGATCTGGAAGCAGCACCGGCCGCGTTGGCAAGGCTGTTCTCAGTAGAATGGTACAGAAACAGGATCAATGGGAAGCAGGAAGTGATGATAGGCTATTCTGACTCTGGCAAAGATGCTGGAAGGTTTTCAGCTGCGTGGCAGCTGTACAAGGCTCAAGAGGAGCTTATAAAGGTGGCTAAGGAGTATGGTGTGAAGCTGACAATGTTCCATGGTCGTGGTGGGACGGTCGGAAGAGGAGGTGGTCCAACTCACCTTGCTATTCTGTCTCAGCCTCCGGATACCATCCATGGATCGCTGCGTGTGACTGTCCAAGGTGAAGTCATTGAGCAATCGTTTGGAGAGCAGCACTTGTGTTTCAGAACGCTTCAGAGGTACACTGCAGCTACTCTAGAACATGGAATGCACCCTCCAATTTCTCCCAAACCAGAATGGAGGGCTTTGATGGATGAGATGGCTGTCATTGCCACTGAGGAGTACCGGTCCATTGTGTTCAAAGAACCACGTTTTGTTGAGTACTTCCGCCTGGCCACGCCTGAGTTGGAGTATGGAAGGATGAACATTGGAAGTCGACCAGCAAAGAGGAGGCCAAGTGGAGGTATTGAGACACTGCGTGCTATACCTTGGATCTTTGCCTGGACACAAACAAGGTTCCATCTTCCAGTGTGGCTAGGCTTTGGTGCAGCATTCAAACATGTTATTGAGAAGGATGTTAGGAATATTCATGTGCTGCAGGAGATGTACAACCAATGGCCTTTCTTCAGGGTCACTCTTGATTTAGTGGAAATGGTGTTTGCCAAAGGAGACCCAGGGATTGCTGCTCTGTATGATAGGCTCCTTGTTTCAGAGGATCTGTGGTCATTTGGGGAGCAGTTGAGGACCAAGTATGAAGAAACTAAGGAACTCCTCCTTCAGGTGGCTGGCCATAGGGATCTTCTTGAAGGAGATCCATACCTGAAGCAAAGGCTTCGACTGCGTGATTCTTACATTACTACCCTAAACGTGTGCCAAGCCTACACATTGAAACGTATCCGCGATCCAAACTACAACGTGAAGCTGCGCCCTCACATCTCCAAAGAGTCTATAGAGATATGTAAACCTGCTGATGAACTCATAACACTTAACCCAACAAGTGAATATGCACCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAAAACACTGGCTAA 2604 0.4716 MLNLANLAEEVQIAHRRRNKLKKGDFADESNATTESDIEETLKKLMVDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNNLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPTFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSKIEDLMFELSMWRCNDELRVRADELHRSSKKNAVAKHYIEFWKVIPPTEPYRVLLGEVRNRLYQTRERSRHLLAHGYSDIPEEETFTNVEEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEEKRQQWLLSELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSVEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNIHVLQEMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDRLLVSEDLWSFGEQLRTKYEETKELLLQVAGHRDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEICKPADELITLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00557 867 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 867 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1 867 IPR015813 GO:0003824
Pumo11g00557 867 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 68 79 IPR018129 -
Pumo11g00557 867 Gene3D Phosphoenolpyruvate/pyruvate domain 208 345 - -
Pumo11g00557 867 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 493 505 IPR033129 -
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 533 562 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 67 80 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 491 511 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 180 195 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 120 136 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 342 362 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 PRINTS Phosphoenolpyruvate carboxylase signature 665 691 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 FunFam Phosphoenolpyruvate carboxylase 1 208 345 - -
Pumo11g00557 867 Coils Coil 4 24 - -
Pumo11g00557 867 Pfam Phosphoenolpyruvate carboxylase 1 867 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo11g00557 867 Hamap Phosphoenolpyruvate carboxylase [ppc]. 1 867 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00557 Pumo-Chr11 19734583 19741191 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00557 K01595 - gmx:100820574 1687.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00557 11 19734583 19741191 Pumo4g03185 4 65405851 65412358 PCT