Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02348 ATGGACGACCACCGAAACTCGACACCCAAAAACGCCATTGGCCTCTGCCTCCTCCCGCAGGAGCTCATCCAAAACATCTTCCTCTCCCTAGTACTCCCCGAAATAATTCGCTTAAAACTCGTCAACAAGTCCTTCTCCGAAATCATCTCCGACCACACCTTCGTTCGCCAGTGCAACAGTTTATCCACCTCCACCACGTGGCTCTTCGTCTACAAGAAGCGCTGGCTCCGCGACGCCGTGCTCCACGCCTTCACCGACCGGAGCTCCGACCGCTGGTTCCGCATCCCCATCGCGGAGCTCCTCAAACCGCTCCACTTCCACGGCGAGGACCTCTACTTCCTCGCCGCCTCCAACAACGTCTTCCTCTTCGCCTCCAACACCGTCCGCGAAGTCGTCGCCGTTAACCTAATCGCCGTCACCGTCAAGAAGATCCCTCCCTCCCCCTTGGGTCCACGTGGCACCTCCTCGTGGCGACGCTCCGGAATGAAGCTCGTCGCCGACCCCTCCGGCTCGGGCCAGTTCCGCTTCATGTTCGCGGAGTTTGTCGCCAACCGCCCCGTCCTGTTCGTGTACGACTCGGAAGCCGACACGTGGAAGTCAACCGAGGCCGAGGAAAACAATAACCAGTTCAATCACCAGTTCTTGCCACGTGGCACGGGTCACGTGTTTCTCAACGTGGTTCACGGGCCTCGGGAGAGCGTTCTGGTCGCGTCGTCGCACGAATGCGACGACGCGCCCGTGGTTCTCCGACCCAGATTTAACGGTGTCGGAGGTAACTTAACGGTCGGATTTAGCTGGGGGAACGTGATTGACCGGTTACACGTGTACGGTGATGGGTACATGATGATTGTGAAATCGGAGGGGGATGCGAGGAACGTGAGGGTGCTGAAGGGTGTGGAGCTCTGGGGTTTGAGTCTGGATGGAAGCAAGTGGGAGTTTGTGTCTGCGGTTCCTGGCGTGATTGAGAAGCCTTATGCGGCAATGATGGGTTGTTTGGAAGAGAAAAATGGGATCGTTCGGGCTGCGTTGGTTTCCAATTGTGAGGGTGTTTGGGACATGACGTGGCTCTCTTTTGATACCAAGTGGAACCGGTGGACATGGATGCCTCTCCCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGAATAAGCTTCTCCTCTGGACTCACTTTGCCATGA 1179 0.5691 MDDHRNSTPKNAIGLCLLPQELIQNIFLSLVLPEIIRLKLVNKSFSEIISDHTFVRQCNSLSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIAELLKPLHFHGEDLYFLAASNNVFLFASNTVREVVAVNLIAVTVKKIPPSPLGPRGTSSWRRSGMKLVADPSGSGQFRFMFAEFVANRPVLFVYDSEADTWKSTEAEENNNQFNHQFLPRGTGHVFLNVVHGPRESVLVASSHECDDAPVVLRPRFNGVGGNLTVGFSWGNVIDRLHVYGDGYMMIVKSEGDARNVRVLKGVELWGLSLDGSKWEFVSAVPGVIEKPYAAMMGCLEEKNGIVRAALVSNCEGVWDMTWLSFDTKWNRWTWMPLPDCKMKGWNMAGISFSSGLTLP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02348 392 SUPERFAMILY F-box domain 5 75 IPR036047 GO:0005515
Pumo10g02348 392 CDD F-box_SF 18 50 - -
Pumo10g02348 392 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Pumo10g02348 392 SMART fbox_2 18 58 IPR001810 GO:0005515
Pumo10g02348 392 PANTHER BNACNNG10540D PROTEIN 17 372 - -
Pumo10g02348 392 Pfam F-box domain 17 54 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02348 - - gmx:100805433 712.22