Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02339 ATGTGTGCAAGTAATTTGTTCAGGGTTTTCCCTCCTAAGTTTCGTCCTGGTGCTACTGGTGGGGAAACAGAAGACGAAGAGCTTATGTTTGATCCTGCCTGGTCAAACCTGCAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATAATTCACTTGATCTAAAGGTGGCAAAAATGCATATTGATCACACTTTCATTGTAAGATTGCTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGATTGCCTGAAAACAATTCTGCATAGAATCTATGGGAAATTCATGGTACACAGGCCTTTCATACGGAAGTGTGTCAGCAATATCATCTACCGTTTTGTTTTTGAGACTGAACGGCATAATGGAATTGCTGAGCTGTTGGAGATTTTTGGGAGTGTCATTTGTGGGTTTGCCGTGCCATTGAAGGAGGAGCACAAAATGTTTTTGTGTAGGGCTTTAATACCTTTACACAAACCTAAATCTGTTGGTATTTATCATCAGCAGTTAACATATTGTGTTGTACAGTTCATCGATAAGGATCCAACACTGGCTAGCACTGTGATAATGGGACTATTGAAGTACTGGCCAGTAACAAATAGCCAAAAGGAGCTAATGTTCATAAGTGAGTTGGAAGAGGTTTTGGATGTGACAATCATTTCTGAATTTCAGAAGATTATGGTCCCATTGTTTCGACGCATAGCTTGCTGTCTTAATAGCTATCATTACCAGGTGGCTGAGCGAGCTCATTTGCTATGGAACAACGAGCACATCCTCGACATTGTCACCCAAAACCGGCAGGTGATCCTGCCTCTTGTGTTCTCAGCACTTGTACATAACACCCAAAACCACTGGAATCGAACAGTGCTCAACCAGACCGAGAACATGAGGAAGATGCTGTCTCAGATGGACGAGGAACTGGTGCTCGCCTGCCAACGCAAGTTGGAGGAGGAAGACTCAAGGTCAAGCGCCGCAGCCGAGCGGCGGAGAATAACGTGGGAACGTCTCGAAGCGGCTGCCAATGTCCAGCAAGATGTTCTAGCATCTCCTGCATGTTCTGTTGTGGCATGCTAG 1074 0.4385 MCASNLFRVFPPKFRPGATGGETEDEELMFDPAWSNLQIVYDLLLQFINYNSLDLKVAKMHIDHTFIVRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKCVSNIIYRFVFETERHNGIAELLEIFGSVICGFAVPLKEEHKMFLCRALIPLHKPKSVGIYHQQLTYCVVQFIDKDPTLASTVIMGLLKYWPVTNSQKELMFISELEEVLDVTIISEFQKIMVPLFRRIACCLNSYHYQVAERAHLLWNNEHILDIVTQNRQVILPLVFSALVHNTQNHWNRTVLNQTENMRKMLSQMDEELVLACQRKLEEEDSRSSAAAERRRITWERLEAAANVQQDVLASPACSVVAC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02339 357 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 342 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g02339 357 PIRSF PP2A_B56 1 354 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g02339 357 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 1 340 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g02339 357 SUPERFAMILY ARM repeat 1 321 IPR016024 -
Pumo10g02339 357 Gene3D - 1 339 IPR011989 -
Pumo10g02339 357 FunFam Phosphoprotein phosphatase, putative 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02339 Pumo-Chr10 33777680 33779590 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02339 K11584 - gmx:100814349 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02339 10 33777680 33779590 Pumo10g02339 10 33777680 33779590 ECH