Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02336 ATGGTTGCAACAGCGGCAACGGCGTCGTTTATCCCTGTGCCTTCGCCGGAAGGGAAAGCCAAGAAACTCGGTGGTGGCGGTGGCGCCGCGAGCCTCGGAGGACTCAAACAGAAACAAGGATTATGCGGTGGCTTGCAGGTCAAGGCAAACGCTCAGGCCCCACCGAAGACGGCAGAGAAGAAGGTTGAGAACGAGTTGCCGTCGTCGTCGACGTCGCTCTCTCACGCCCCGAGAACCTTCATCAACCAGTTACCCGATTGGAGCATGCTTCTGGCCGCCATCACCACCGCGTTCCTTGCGGCGGAGAAGCAGTGGATGATGCTCGATTGGAAGCCCAGGCGCCCCGACATGCTCGTCGACCCGTTTGGGATTGGGAAGATCGTGCAGGACGGGCTCGTGTTCAGGCAGAACTTCTCCATCAGGTCCTACGAAATCGGCGCCGACAAAACCGCGTCCATAGAGACGCTAATGAATCATTTGCAGGAGACTGCACTTAATCATGTTAAGACAGCTGGGCTTCTTGGTGATGGTTTTGGTTCCACGCCTGAAATGTGCAAGAAGAACCTGATATGGGTGGTGACTAAGATGCAGGTTGTGGTTGATAAATATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCATCAGGGAAGAACGGTATGCGTCGCGATTGGCTTGTGCGTGACGCCAAAACGGGTGAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAGACTGTCTAAAATTCCCGAAGAAGTCAGAGCTGAGATAAGCTGTTATTTTGTGGATTCTGCTCCAGTTGTGCCAGAGGATAACAGAAAACTACCCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAATCAGCATGTTAACAATGTGAAATATGTTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTTTGGAGAGTCATGAGCTGTGTGCCATGACTTTGGAGTACAGGAGGGAGTGCAGCAGGAAGAGTGTGCTGGATTCCCTGACTGATATCTCTGGTGCTGATGCAGGGAATTTAGCAGATGGTGGATTATTTGAGTGCAAGCACTTGCTTCGACTTGATGATGGTGCTGAGATTGTGAGGGGCAGGACTGAATGGAGGCCCAAACCTATAAACAACTTTGGTGTTTTGAGTCAGGTTCCAGCAGAAAATGCACCTGAATATTGA 1248 0.504 MVATAATASFIPVPSPEGKAKKLGGGGGAASLGGLKQKQGLCGGLQVKANAQAPPKTAEKKVENELPSSSTSLSHAPRTFINQLPDWSMLLAAITTAFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDKYPTWGDVVQVDTWVSASGKNGMRRDWLVRDAKTGEILTRASSVWVMMNKVTRRLSKIPEEVRAEISCYFVDSAPVVPEDNRKLPKLDDSANFIRTGLSPRWNDLDVNQHVNNVKYVGWILESAPQPLLESHELCAMTLEYRRECSRKSVLDSLTDISGADAGNLADGGLFECKHLLRLDDGAEIVRGRTEWRPKPINNFGVLSQVPAENAPEY 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02336 415 MobiDBLite consensus disorder prediction 52 75 - -
Pumo10g02336 415 Pfam Acyl-ACP thioesterase 131 394 IPR002864 GO:0006633|GO:0016790
Pumo10g02336 415 CDD 4HBT 134 250 - -
Pumo10g02336 415 Pfam Acyl-ATP thioesterase 1 120 IPR021113 GO:0016790
Pumo10g02336 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 128 280 IPR029069 -
Pumo10g02336 415 FunFam Acyl-[acyl-carrier-protein] hydrolase 125 399 - -
Pumo10g02336 415 Gene3D Hotdog Thioesterase 124 400 - -
Pumo10g02336 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 292 398 IPR029069 -
Pumo10g02336 415 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 56 397 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02336 Pumo-Chr10 33752921 33756942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02336 1 402 Acyl Lipid Metabolism Gene Families AT1G08510 72.596 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02336 K10781 - gmx:100797796 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02336 10 33752921 33756942 Pumo10g02336 10 33752921 33756942 ECH