Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02333 ATGGCTCCAAATTGCTGGCACATAGTGGCAGTCCTTCTTGTCTTCTCAACTGTGGTTTCCAGTGGCCATGCTTGGGTTGGTGTGAACTGGGGAACCATGGCAACCCACCAGCTTCCACCAGAGAAGGTGGTGAAGATGCTGAAGGAAAATGGGTTCAGAAAACTGAAGCTGTTTGATGCAGATGAGTTCATTATGGCAGCTCTGATGGGGTCTGATATTGAAGTGATGGTGGCAATACCCAACAACATGTTGGACAAGATAAGCAACCGTCCCAAAGCTGCAGATTCTTGGGTGAATGATAATGTCACCAGTTACTTGTTCACTGGTGGTGTCAAAATCAAGTACGTTGCCGTGGGTAATGAGCCTTTCCTCAAAGCATATAATGGCACCTTTGCAAAGAAAACGCTGCCAGCCCTCAAGAATATACAGGCATCGCTTAATAAGGCAGGGTTTGGTTCAAAGATCAAAATCACTGTTCCATTCAATGCTGACATTTACTATTCACCTGATTCAAATCCGGTGCCATCAGCTGGTGACTTCAGGCCTGAAGTGAGAGACCTCACTGTCGAAATAATCCAATTCTTATACGCAAACAACGCCCCTTTCACGGTGAATATCTACCCTTTCCTTAGTCTTTACGGCAACGAGGATTTCCCTTTTGATTTTGCATTCTTTGATGGAAACAACAAGCCTCTTAGGGATGGTAAGGCACTCTACACCAATGTGTTTGATGCAAATCTTGACACACTTCTGTGGGCTTTGGACAAGGCAGGATACCCTGACATGAAGGTCATGATTGGAGAAATTGGGTGGCCAACTGATGGTGACAAGAATGCTAATGCCAAGAATGCAAAGAGGTTCAACTTGGGTTTGCTTAAACATGCACTGAGTGGCAAGGGTACCCCTAAAAGGAAAGGCACAGTTGACTTGTTTCTATTCAGCCTCATTGATGAGAACACTAAAAGTGTTGCTCCTGGGAACTTTGAGAGGCACTGGGGGATTTTTGAGTTTGATGGCAAGCCAAAGTATGAACTAGACTTAACAGGTCAACATAAGGGAAAGGGTCTTATCCCTGTGGAAGGCATCAAGTACCTGGAGAAGAGGTGGTGTGTTTTGGATCCAGAAGTTACTAACTTGGATGATTTGGCTAGTAGCATTGACTATGCTTGCACCTTTTCTGATTGCACTTCCCTTGGCTATGGCTCTACTTGTAACAATCTTAGTGTCCAAGGGAATGCATCTTATGCCTTCAATATGTATTATCAAGTGAACAACCAACAGGATTGGGACTGTGATTTCTCTGGTTTGGCTGTCATAACACATAAGGATCCATCACAAAATGGATGCCAATTCCCTGTAATGATTTCTCATAGTTCTTCTTTGCTACTGCATGGAGGGCTTTCAGACATCCTTAAGAAAGCACTGAGAGTGTATATTTTTGTCATGTTTTTGCTATAG 1458 0.4383 MAPNCWHIVAVLLVFSTVVSSGHAWVGVNWGTMATHQLPPEKVVKMLKENGFRKLKLFDADEFIMAALMGSDIEVMVAIPNNMLDKISNRPKAADSWVNDNVTSYLFTGGVKIKYVAVGNEPFLKAYNGTFAKKTLPALKNIQASLNKAGFGSKIKITVPFNADIYYSPDSNPVPSAGDFRPEVRDLTVEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFFDGNNKPLRDGKALYTNVFDANLDTLLWALDKAGYPDMKVMIGEIGWPTDGDKNANAKNAKRFNLGLLKHALSGKGTPKRKGTVDLFLFSLIDENTKSVAPGNFERHWGIFEFDGKPKYELDLTGQHKGKGLIPVEGIKYLEKRWCVLDPEVTNLDDLASSIDYACTFSDCTSLGYGSTCNNLSVQGNASYAFNMYYQVNNQQDWDCDFSGLAVITHKDPSQNGCQFPVMISHSSSLLLHGGLSDILKKALRVYIFVMFLL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02333 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 440 IPR044965 GO:0004553|GO:0005975
Pumo10g02333 485 FunFam Glucan endo-1,3-beta-glucosidase 8 364 460 - -
Pumo10g02333 485 Gene3D - 364 459 - -
Pumo10g02333 485 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Pumo10g02333 485 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Pumo10g02333 485 SMART X8_cls 368 451 IPR012946 -
Pumo10g02333 485 FunFam Glucan endo-1,3-beta-glucosidase 5 25 353 - -
Pumo10g02333 485 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Pumo10g02333 485 Gene3D Glycosidases 25 354 - -
Pumo10g02333 485 Pfam X8 domain 369 437 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02333 Pumo-Chr10 33722749 33725255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02333 26 455 Miscellaneous Gene Families AT2G19440 59.302 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02333 - - gmx:100781894 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02333 10 33722749 33725255 Pumo10g02333 10 33722749 33725255 ECH