Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02321 ATGCTGAAATATGACACATTCATGCCCCATGCACGAGTTCATTATTATCCTAACACAGAAGCCACAGCAGATGTATACCCTGCAGATGATGCCTATGCAATGTTCTTGTGGGTGGGTACCCCAGTGCAAATTGTGTTCGTTATGATTGACACATGGAGCCCCATCACATGGTTCCAATGCGACCCTTGCAGCAACTGTTACCCCATGCAGCGCCCTCCCTTCAACACACGCGCATCAATCTCCTTCAGAGAACTTGGCTGCTACTCCGACACGTGCCTCATCCCAATGATGAGGGGCATTTTCGGAAACTGCACTGGATGGACTTGTAGGTACAACATGGAATATGAATATGAGTATACCAATGAATCTCAATCTCGCTCCTTTGGTATGATGGTCACTGAAACCCTCAATTTCGAGCACTCCAACGTTCAAGTCAAGGACTTCATAATGGGGTGTGGGGACTCATATGAGGGACCCTTTCGAACTCAATTTTCAGGAGTTTTTGGTCTCGGACGTGGTCCACTTTCAGTGCAAAGCCAGCTTCATGCAAAGGCCTTTTCGTTTTGCATAGTGAGTCTTGGATCGGAGAAACCCTCTTCTCTTGAGTTTTATGACACACCACCCAAACCAGACCAACATGGTAACACCAACAGTTCCATCATGGTTCCCTTGAGAGAGAACAGTAGGTACCCTTACTATTACTTCGTGCAGTTTGTGGGAATAGGCATTAACGGGTTCATGTTAGATATTCAATCTAGGGTTTGGGGTTATGGCTTGAACTATGATGGTGGGGTTGTTGTAGATACAAAAACAGTGCTAACCTACTTGCCACGTGATGCATATAGTGTGTTCAGGTCAGAGATTCTCAGAACAGATGTTAACCTTACGAAGAAGCCAGGGTTTGAGGAGTTGGAGTTTTGTTACAAAGAAGGTCCAACCAATGTGTATCCAACCGTTGAGTTTTACTTTGAAAATGGTAACATTGAGGGTGAAAATTTTGTGTCTTTCAAGTTGGACAACAAGCAGTTGTTGTTTTCAGTGGAAGAGGGAACAGTTTGCTTATCGTTTGCTGAAGGGAAAAATTCTGCACTTACCGTGATTGGCAGTAACCACCTCCAAGGAACTATGTTAACTTATGATTTGGTTAATGAGATCCTTGTCTTCACATATAATAAGTGTTAG 1182 0.4399 MLKYDTFMPHARVHYYPNTEATADVYPADDAYAMFLWVGTPVQIVFVMIDTWSPITWFQCDPCSNCYPMQRPPFNTRASISFRELGCYSDTCLIPMMRGIFGNCTGWTCRYNMEYEYEYTNESQSRSFGMMVTETLNFEHSNVQVKDFIMGCGDSYEGPFRTQFSGVFGLGRGPLSVQSQLHAKAFSFCIVSLGSEKPSSLEFYDTPPKPDQHGNTNSSIMVPLRENSRYPYYYFVQFVGIGINGFMLDIQSRVWGYGLNYDGGVVVDTKTVLTYLPRDAYSVFRSEILRTDVNLTKKPGFEELEFCYKEGPTNVYPTVEFYFENGNIEGENFVSFKLDNKQLLFSVEEGTVCLSFAEGKNSALTVIGSNHLQGTMLTYDLVNEILVFTYNKC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02321 393 Gene3D Acid Proteases 16 203 IPR021109 -
Pumo10g02321 393 Gene3D Acid Proteases 208 393 IPR021109 -
Pumo10g02321 393 SUPERFAMILY Acid proteases 28 393 IPR021109 -
Pumo10g02321 393 PANTHER ASPARTYL PROTEASES 25 384 IPR001461 GO:0004190|GO:0006508
Pumo10g02321 393 Pfam Xylanase inhibitor C-terminal 234 389 IPR032799 -
Pumo10g02321 393 ProSiteProfiles Peptidase family A1 domain profile. 32 389 IPR033121 -
Pumo10g02321 393 Pfam Xylanase inhibitor N-terminal 32 201 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02321 Pumo-Chr10 33461064 33462994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02321 21 393 Miscellaneous Gene Families AT1G77480 22.335 1.31e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02321 - K22683 gmx:102668643 728.783