Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02295 ATGAAGGAGGCGTTGTTGTTGGGAGAGGAGAAGAAGAACAAGAGTGAGAGGAAGAGAGGGAGGGTAGTTTGGGAAGGGTTGATGATGATGGGTCTGAAGGGGGAAAGCAACAATAAGTTGAAGAATTCGGTGGTGGTGTCGTCGGCGGCGAGGTCGTCGAGGACGAAGCTGTGGATGATACGCGCCACCACATCGGTGCTACTCTGGACCTGCGTCGTTCAGTTAATGGCCTTGGGCGATACGTGGGGCCCGCGAGTCTTGAAAGGGTGGCCGTCGTGTTTCACGCACGAAGCATCCGCGCTCATTGAGTTGCCGCCCGCCACGCCAAGAGTGCTCCCGCCCAAGAGAGTTTATAAAAACAACGGTTACTTGATGGTGTCGTGCAATGGAGGACTGAACCAAATGAGGGCCGCGATATGTGACATGGTGGCGATTGCAAGGTATTTAAATGTGACGCTTATAGTGCCTGAATTGGATAAAGCGTCCTTTTGGGCTGACCCCAGTGAGTTCCAAGACATCTTTGATGTGGATCATTTTATTACATCCTTGAGGGATGAAGTTCGGATATTGAAGGAGTTGCCTCCTAGACTCAAGACTAGAGTGGAAAATGGATTACTTTACACCATGCCACCGATTAGTTGGTCTGACATATCATACTATAAGAACCAGATTCTACCTTTGATACAAAAGTACAAAGTTGTCCATTTAAATCGAACAGATGCCCGGCTGGCCAATAATGATCAACCTTTGGAGATTCAGCGGCTGCGTTGCAGAGTCAATTTTAGTGCTCTTAGATTTACTTCTCAGATTGAGGAGCTAGGCAGAAGGGTTATCAAGCTTCTGAGGCAAAATGGCCAATTTTTGGTGCTTCATCTGAGGTATGAGATGGACATGCTGGCATTTTCTGGCTGTACACAAGGTTGCAACAGTGATGAGGTGGAGGAGTTGACTAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTGTGTCCTTTAACACCTGAGGAGACTGCCCTTACACTTAGGGCCCTTAACATCGATCAAAACATTCAAATCTACATTGCAGCCGGGGAAATATATGGTGGGGACAGGAGAATGGCAAGTCTTGCGAAGAACTATCCAAAATTGGTCAGAAAGGAAACACTGTTGGAACCATCTGACCTTCAGTTCTTCCAAAATCATTCCTCTCAGATGGCGGCATTGGATTACCTTGTGTCGTTAGAGAGTGATATCTTTGTTCCTACATATGATGGAAATATGGCCAAAGTAGTCGAGGGTCATCGCAGGTATCTTGGGTTCAAGAAGACAATTTTATTGAACAGAAAGCTCCTAGTAGATTTGATAGACCAATACCATAGTGGAGTATTGAACTGGGACGAATTCTCTTCAGCTGTGAAGGAAGCTCATGCTGATCGCATGGGTGGTGCAACCAAGAGATTGGTAATCCCTGACAGGCCCAAAGAAGAGGATTACTTCTATGCCAATCCAGAGGAATGTTTAGAACTATCGGATGATACGTTGAGTAGTACGTGA 1569 0.457 MKEALLLGEEKKNKSERKRGRVVWEGLMMMGLKGESNNKLKNSVVVSSAARSSRTKLWMIRATTSVLLWTCVVQLMALGDTWGPRVLKGWPSCFTHEASALIELPPATPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVENGLLYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNDQPLEIQRLRCRVNFSALRFTSQIEELGRRVIKLLRQNGQFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALNIDQNIQIYIAAGEIYGGDRRMASLAKNYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQYHSGVLNWDEFSSAVKEAHADRMGGATKRLVIPDRPKEEDYFYANPEECLELSDDTLSST 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02295 522 PANTHER OS02G0726500 PROTEIN-RELATED 51 512 - -
Pumo10g02295 522 FunFam O-fucosyltransferase 28 258 452 - -
Pumo10g02295 522 PIRSF UCP009360 24 509 IPR024709 -
Pumo10g02295 522 CDD O-FucT_plant 123 448 IPR024709 -
Pumo10g02295 522 Pfam GDP-fucose protein O-fucosyltransferase 123 443 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02295 Pumo-Chr10 32567911 32571289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02295 119 512 Miscellaneous Gene Families AT2G37980 49.747 2.10e-131 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02295 K23280 - gmx:100778901 971.459