Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02014 ATGGGGTCTTTGATGAGTTCACCGAAAAGCAAAGAAGAGATGGAAGCAGCGTTGAATAAGGCTAAGGAGATTGTATCCTCCGCCCCTGTCGTTGTCTTCAGTAAGACTTACTGTGGTTACTGCAAGCGAGTCAAAGAACTCTTCAAACAGCTAGGAGCAGCCTACAAGGTTGTTGAATTGGACACGGAAAGTGATGGGGGTGATATTCAATCAGCTTTAGCTGAGTGGACAGGGCTTAGGACCGTGCCTAACGTGTTTATTGGAGGAAAACACATTGGTGGTTGTGACACTGTTTTGGAGAAACACAGAGCAGATAAACTGGTTCCACTTCTCAATGATGCTGGGGCGATAGCCAATAACTCTGCTCAACTCTGA 375 0.4613 MGSLMSSPKSKEEMEAALNKAKEIVSSAPVVVFSKTYCGYCKRVKELFKQLGAAYKVVELDTESDGGDIQSALAEWTGLRTVPNVFIGGKHIGGCDTVLEKHRADKLVPLLNDAGAIANNSAQL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02014 124 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Pumo10g02014 124 SUPERFAMILY Thioredoxin-like 19 117 IPR036249 -
Pumo10g02014 124 CDD GRX_GRXh_1_2_like 29 110 - -
Pumo10g02014 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Pumo10g02014 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Pumo10g02014 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Pumo10g02014 124 Gene3D Glutaredoxin 9 124 - -
Pumo10g02014 124 NCBIfam glutaredoxin 30 110 IPR011899 -
Pumo10g02014 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Pumo10g02014 124 PANTHER GLUTAREDOXIN 2 8 117 - -
Pumo10g02014 124 FunFam Glutaredoxin 2 15 124 - -
Pumo10g02014 124 Pfam Glutaredoxin 30 92 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02014 Pumo-Chr10 26556373 26559795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02014 18 117 Miscellaneous Gene Families AT4G15700 40.000 1.39e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02014 K03676 - qsu:111991481 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02014 10 26556373 26559795 Pumo10g02014 10 26556373 26559795 ECH