Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02003 ATGATCCATTTTTTGAAGCTCACCACAACCACAGAACAAGACAAACAACAGCAATGCATGATGATGATACAACCAAACAATGATGATGATGTTGTTGTCCCAGAACACACATGTGCACAACAACAACAAAACCATTCTCGAAAATTGGCTGCTTCTTCTTTCACTTCCCAAAATGCTCCACCTGTGCTACCTGCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAGCAGCAATGTGCCACCCCCTGCAGCAGGGGAACCACACTTTTAGGCCTGCTCATGAGTTGCTCAACTTGACGAGAGTCAGAGCTCACTTGAAGAACATCAACAAGCCTCCTGTCAAGACAATTCAGAGCCCAGATGGTGATTTGATAGATTGTGTTTTATCTCACCAACAGCCTGCTTTTGACCATCCTAAGCTTAGAGGGCAGAAACCATTGGATCCACCAGAGAGGCCAAAGGGAAACCACACCAATGGTGAAGCTGAAAGGGTAATTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAGCATGCCCAGAAGGAACTATTCCAATCAGAAGAACAACAGAGGAGGATGTTCTCAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGACCCGTACGGAGAGACTCTACTGGTAGTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATACTATGGAGCAAAAGCTAGCATAAACGTGTGGGCACCCCGTGTAACCGATGAATTTGAATTCAGCTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTCAACACCATAGAAGCTGGTTGGCAGGTAAGTCCACAACTATATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACTACTGATGCATATCAAACAACTGGGTGCTACAACTTACTCTGTTCAGGCTTTATCCAAACCAACAATAGGATAGCAATAGGTGCAGCAATTTCCCCAAGATCCGCTTACAACAGAAGACAATTTGATATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGCTGGAGTTTGGGTCAGTACTAGTTGGGTACTGGCCAGCAAACATGTTCAGTCACTTGAGGAATCATGCAAGCATGGTGCAATTTGGAGGAGAAATTGTGAACACTCGTTCAAGGGGTTACCACACTGGCACCCAAATGGGGAGTGGCCATTTTGCTGAAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTGCAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAATATTCATCACTTGGCTGATCATTCCAATTGCTATAACATAAGGCAGGGGGCCAACAATATTTGGGGAACTTACTTTTACTATGGAGGACCTGGAAGGAATGTGAGATGCCCATGA 1407 0.4428 MIHFLKLTTTTEQDKQQQCMMMIQPNNDDDVVVPEHTCAQQQQNHSRKLAASSFTSQNAPPVLPAFVALLLLVTSIAPAAMCHPLQQGNHTFRPAHELLNLTRVRAHLKNINKPPVKTIQSPDGDLIDCVLSHQQPAFDHPKLRGQKPLDPPERPKGNHTNGEAERVIESFQLWSDSGEACPEGTIPIRRTTEEDVLRASSIRRFGRKPRPVRRDSTGSGHEHAVVFVNGDQYYGAKASINVWAPRVTDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRIAIGAAISPRSAYNRRQFDIGLMIWKDPKHGHWWLEFGSVLVGYWPANMFSHLRNHASMVQFGGEIVNTRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLRNIHHLADHSNCYNIRQGANNIWGTYFYYGGPGRNVRCP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02003 468 FunFam Putative carboxyl-terminal proteinase 242 360 - -
Pumo10g02003 468 Pfam Neprosin 252 461 IPR004314 -
Pumo10g02003 468 MobiDBLite consensus disorder prediction 143 162 - -
Pumo10g02003 468 MobiDBLite consensus disorder prediction 137 162 - -
Pumo10g02003 468 Gene3D - 243 360 - -
Pumo10g02003 468 Pfam Neprosin activation peptide 118 226 IPR025521 -
Pumo10g02003 468 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 104 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02003 Pumo-Chr10 26396205 26401828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02003 - - gmx:100777828 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01437 4 18193030 18196954 Pumo10g02003 10 26396205 26401828 ECH
Pumo10g02003 10 26396205 26401828 Pumo10g02003 10 26396205 26401828 ECH
Pumo4g01437 4 18193030 18196954 Pumo10g02003 10 26396205 26401828 PCT