Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01996 ATGGACGCAGATTCTGAATATCGTGAAAATAGTGATTCTACCTTTGTTTGGGATGAAAAATCACAACTTTACTTCCATGCCAGTAGTGGATTTTACCATGACCCTAATGCTGGCTGGTACTATAGCGGCAGGGATGGTGCTTATTACAAATTTGAGGATGGAAATTATGTGCTTTTAGATTCCAATAAGGACGATAGTATAGAAACATATCAGTGCAAGGAAACTACAACAGAAAATCCTCAACAAATATATGATGGTAACAACAATGAGGATCATCCTTCCTTCGTTGAAAGTAAATTTGAAACTAACCAACAGACAGGAACCCTGGCTGATGAAGCTCATGCTGATGCCACAAATTCCGTGAGTAGTCCAGCTTGTGAAAATCCTCCTCCACCACCATCAGAATGGTTAGAGGACACTCTTATCGATCTTTACTTATCTGGCTACAAGAACGTAGCAGTTAGTGAAGCTGATGCAGTGACAGTGCTGTTGGAGACAGATGATAGATATAACTCGTTAGCAGCTGATGCCTACAGCAAAACTTATGAAGTGGAAGGCGAGTGGATCCCAGAACCAGGGGATGAAAATGGCTTAGCTGATAATAGAAGTACTGTGGATGAAGGTATATCTTACAGCAACACTTATGAACTGGAAGAAGGTGAGTGGATCCCAGACATGGAGGACGAATATGGCATAGCTGATAGAAGTACCATAGATGAAGCTATCCTGTTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAAACAGGGAAAGATCTGGTTTCAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTATGGGATCCAAAAGAGATGGAAAAGATAAGGTGGCAAGGTTGGTCGGTAGACTAGTGAAACCATCTGCAAAACAACATCCTTCTATCCCTTCTAGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTCAATCTGGTACGAGTTAAAACAGGACAAGTGTACAGATTGCGAAATCCTAGTGCAAAATATGTGGCTTCATTATCAACTTATGATTCTTCCAATCCAACAGAATATTGGGATTTTCCCCAGCTATCACCTAATAGAAAAATCACTCGTCTCTCTAAGTCCAGTGAAAGCTCTGCTTCAGCTTCGGATGAAACCCCAATAGAGAAGGATTTGTCTGTGTTGCCAAGTCAGCTCTCTGCATCTAAGAAAATAAAACATCAATACAGAGATAGGGCTGCTGAAAGGAGAATATTGCATGGTGGCTTCGGCATGGGACCAGGACAGAAGAATCTGCCGGACATTTATAATACACCATCTTCACCTGATGATGGTTATCCACAAGAAGCTACATCAGAGGCCTTGGAGATGTCATTTGGAGCAGGTAGTTATGCCAGAAAACTTCTAAAAAACATGGGCTGGAAGGAGGGGGAAGGGCTTGGCAGTTCTACGAAGGGCTTGGTGGAACCTATTCAACCAGTTGGAAACGTTGGTACTGCGGGTTTGGGATGGTCTCGTTGA 1527 0.427 MDADSEYRENSDSTFVWDEKSQLYFHASSGFYHDPNAGWYYSGRDGAYYKFEDGNYVLLDSNKDDSIETYQCKETTTENPQQIYDGNNNEDHPSFVESKFETNQQTGTLADEAHADATNSVSSPACENPPPPPSEWLEDTLIDLYLSGYKNVAVSEADAVTVLLETDDRYNSLAADAYSKTYEVEGEWIPEPGDENGLADNRSTVDEGISYSNTYELEEGEWIPDMEDEYGIADRSTIDEAILLDEEKWRAQYGQVTETGKDLVSEVPIVDLWDWEMVMGSKRDGKDKVARLVGRLVKPSAKQHPSIPSSGGKLRSAPICEAHLNLVRVKTGQVYRLRNPSAKYVASLSTYDSSNPTEYWDFPQLSPNRKITRLSKSSESSASASDETPIEKDLSVLPSQLSASKKIKHQYRDRAAERRILHGGFGMGPGQKNLPDIYNTPSSPDDGYPQEATSEALEMSFGAGSYARKLLKNMGWKEGEGLGSSTKGLVEPIQPVGNVGTAGLGWSR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01996 508 SMART G-patch_5 461 507 IPR000467 GO:0003676
Pumo10g01996 508 CDD OCRE 13 54 - -
Pumo10g01996 508 MobiDBLite consensus disorder prediction 74 91 - -
Pumo10g01996 508 Pfam OCRE domain 12 53 IPR041591 -
Pumo10g01996 508 MobiDBLite consensus disorder prediction 372 397 - -
Pumo10g01996 508 PANTHER RNA-BINDING PROTEIN 10 507 - -
Pumo10g01996 508 MobiDBLite consensus disorder prediction 372 388 - -
Pumo10g01996 508 ProSiteProfiles G-patch domain profile. 463 508 IPR000467 GO:0003676
Pumo10g01996 508 MobiDBLite consensus disorder prediction 74 94 - -
Pumo10g01996 508 Pfam G-patch domain 465 505 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01996 Pumo-Chr10 26324041 26328891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01996 - - gmx:100806477 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01996 10 26324041 26328891 Pumo10g01996 10 26324041 26328891 ECH