Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01995 ATGGCCCCAAGCTTAAGCAAAACCGTGGAACTAGAGGCATATGGTCCTGTCAATGGAAACTTACCTTTGTCCATAACCTTAGAAGCATCAAATTTTCTTGCCAACGGCCACCCTTTTCTCACTGAAGTCCCCGCCAACATAATACCCACCCCTTCGCCCATCGACGCCAAGACCAACACCGTCGTGGGTTGCTTCGTGGGGTTCGACGCGGAGGAGCCCAGAAGCCGACACGTGGCGCCGCTGGGCAAGCTGAGGGGAATAAAATTCATGAGCATATTCCGGTTCAAGGTGTGGTGGACCACTCACTGGGTTCGGTAG 318 0.5377 MAPSLSKTVELEAYGPVNGNLPLSITLEASNFLANGHPFLTEVPANIIPTPSPIDAKTNTVVGCFVGFDAEEPRSRHVAPLGKLRGIKFMSIFRFKVWWTTHWVR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01995 105 PANTHER - 27 104 IPR008811 -
Pumo10g01995 105 Pfam Raffinose synthase or seed imbibition protein Sip1 28 104 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01995 Pumo-Chr10 26318906 26319223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01995 27 104 Glycoside Hydrolase AT5G40390 54.762 2.33e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01995 K06617 - gmx:100800308 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01995 10 26318906 26319223 Pumo10g01995 10 26318906 26319223 ECH