Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01962 ATGGCTTCTTCTAATGGACTAGCTACTACGCAGCCACTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTATAGACACAGTCTTCTCATATTGCAGAGAGCAGTTAAAGAATGGAACACTCATCAGAAGCACAAGTTTGTGATTAATCTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGATGCTGTAAAGAAAGTTGTGGATGAATTTGAGATGTTCAGGGGAGGGCCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTTCCTCGCAGCAAGTTACTTCCATTATTGAAGATCCAAACTCTTGATGGCCGTGCATACTATGATTTCTCGCCAGTGCCTGAATATAGATTTGTAGTTCTTGATGCCTATGACATCAGTGCCATCGGTTGGCCTCAAGATCATCCAAAAACATTGGAGGCCTTGAAAATCCTAAGGGAGAAGAATCCAAACGAAGATAAGAACAGTCCATTAAATTTGGAGGGGCCTGAAAGAAGGTTTGTAATGTTTAATGGAGCCGTTGGAAAGGAACAGATGGAATGGTTAGATGGTGTTCTCCTGGAGGCAATAAATTTGAAACAGAAGGTGGTTGTCTGCTGCCATCTGCCTCTAGATCCTGGTGCGGCAACTGAAGAGACACTGTTGTGGAATTACGATGAAGTAATGAATTTGATACACAGATACAATTGCGTTAAGGTCTGTCTTGCAGGGCATGATCATAAAGGCGGATACTCCATTGATTCTCATGGGATACACCATAGAGTTTTTGAAGCTGCTTTGGAATGTCCTCCTGGTACGGATGCATTTGGATACATTGATGTCTACGATGACAGGATATCACTTGTTGGAACTGGCAGAATGGAAAGTACAGACATGCATTTTATTCCCCCGAGTTAA 963 0.4174 MASSNGLATTQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSLLILQRAVKEWNTHQKHKFVINLGDIVDGFCPKDQSLDAVKKVVDEFEMFRGGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEALKILREKNPNEDKNSPLNLEGPERRFVMFNGAVGKEQMEWLDGVLLEAINLKQKVVVCCHLPLDPGAATEETLLWNYDEVMNLIHRYNCVKVCLAGHDHKGGYSIDSHGIHHRVFEAALECPPGTDAFGYIDVYDDRISLVGTGRMESTDMHFIPPS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01962 320 SUPERFAMILY Metallo-dependent phosphatases 12 312 IPR029052 -
Pumo10g01962 320 Pfam Calcineurin-like phosphoesterase 15 263 IPR004843 GO:0016787
Pumo10g01962 320 Gene3D - 9 309 IPR029052 -
Pumo10g01962 320 PANTHER - 7 316 - -
Pumo10g01962 320 CDD MPP_Nbla03831 14 303 IPR041869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01962 Pumo-Chr10 25886687 25890522 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01962 K01517 - gmx:100792911 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01962 10 25886687 25890522 Pumo10g01962 10 25886687 25890522 ECH
Pumo10g01962 10 25886687 25890522 Pumo4g01469 4 18568829 18569824 PCT