Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01954 ATGGGTGGAACAATTTCAAGACGGAGGCGTTCTAGGCAACATTCGTCCTCAAATTTTATTCCTCGGTATCAACAACCTCAATTCCTACAAAGCCAAGATAATGGGTCTGTGGGGCATTATGGGTATTCATCTCAGAGCTATGGTGGTGGTCGTGCTCCAGAACAAGCAAAGAGCTCAGATAGGAAGTATTCAAGGATAGGTGATGATTATAAGAGCCTGGACCAGGTAACTGAAGCTCTGGCAAATGCTGGCCTAGAGTCTTCAAATCTCATTGTCGGGATTGATTTTACGAAGAGCAATGAGTGGACAGGTGGAAGGTCATTTCAAAGGAGATGCCTGCATCACATTGGTCATGAACAAAATCCATATGAACAAGCTATATCTATCATTGGGAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCCTGCTTTGGTTTTGGAGATGCATCAACACATGACCAGGAAGTTTTTAGTTTCTATCCTGATGAGAGATTTTGTCATGGATTTGAAGAAGTGTTGGAACGGTACAGGGAATTGGTCCCTCAATTAAAGCTTGCAGGACCAACATCATTTGCCCCGGTCATTGAGATGGCAATCACCATAGTTGAACAAAGTGGAGGCCAATACCATGTGTTAGTGATTATAGCCGATGGGCAGGTGACGAGAAGTGTTGACATTGAGCATGGGCAGTTGAGTGCACAAGAAAAGAAAACTGTAGAAGCTATTGTGAAAGCTAGTGAATATCCCTTGTCAATCATATTAGTTGGAGTTGGAGATGGACCGTGGGATATGATGAGAAAATTTGATGATAACATCCCTGCCCGAGCATTTGATAATTTCCAGTTCGTGAATTTCACAGAAATAATGTCGAAGAACATGGATCGGTCCAGAAAGGAAACGGAGTTTGCACTCGCTGCCTTGATGGAAATACCCTCCCAGTACAAGGCAACACTAGAGCTTAATATATTGGGTACTCGTAGAGGGAAAGATATAGACCGGATTCCTCTACCACCGCCTCAATATGGTGCAGCATCTTTCAATTCCCCCAAAACTTCCCGTCAAAACAGTTTTCGTCCCAGTGCACCATCTAGCAGACATGATGTTAGCCCGAACCCTCCTGCAACTTCTGCTCCTGATAATCACCATGTTTACTTGTCATTACCCTCAATCCTCATGTTGGAAGTTTGTTTTGTGGTTCACAGTGGCATTCAAAACTTTGTCCCATTTGCCTCACAGATCCTAAGGATATGGCGTTTGGTTGCGGGCATCAGATTCAGCAATGGTGCCAATGTTAGATCCTCCGAAGGGAGAAAAGGGCAGTGGCAACTGCTCCTTAACAACACTGGCGTGGTTGGCATGCATGTGGCTTTAACCTACAAAAACACAGTCATAATGTTTGATCAAACTGGAGCTGGCCAATCCAGTTACCAACTTCGCCGGCGCTTCAATGGAAGCAAATGCACCAGAAGCAACCATGATTTGATGGACTCATCATGCTATGCTCATTCTGTGGAGTATGACATCAGTGCCAACAGAGTGAGGCCTCTGAGGCTTGACACTGATCCTTGGTGCTCCTCTGGTGGATATGAAAAAGGTGCCAAAAGGGTCAGACTCTATAGGCCCTGTGGGAATCACCAATGTGACTGGATACAATCAAAGAAAACACTATCTGATGAGAGGTGGTATGCTTCTAGTCAGATACTACCAGAACATGATAGGGTGGTGGTGCTTGGTGGAAGAAGAGTTTTCACATATGAATTTGTACCAAAAACTAGTCCTGGAGAAAAATCCTTTGACCTTCCATTCCTGCACCAAACCAATGACAGGAGTGCAGGAGGGAACAACCTCTATCCCTTCCTTCACCTCTCATCAGATGGAAACTTGTTCGTTTTCGCCAACCGCGATTCGATCCTACTCAACTTGAGAAGGAACAAAGTGATCAAGACCTTCCCTCGGATTCCGGGGGAAGGGTCAAGAAACTATCCAAGCTCAGGCTCATCCGTGTTGCTCCCATTGGACCATAGAGACAACTTCCAAAAGGTGGAGGTTATGGTGTGTGGAGGCTCATCCACTGGAGCACTTAAAGCTGCTGGCCAGGGAAGATTCTTGGAAGGTTTAAGATCATGTGGGAGAATGGTGATCACAGGGAACAAGAACAAGTGGGATATGGAGTACATGCCCAAGCCACGTCTCCTACATGACATGTTAATTCTCCCTACTGGTAACATTCTGATTATAAATGGGGCTAAACATGGGTGTGCAGGATATGAAAATGCTAGAAACGCTTCTCTCGAGCCTTATCTTTATAGCCCCAACAAAAGACTAGGAAAAAGGTTCACAGTCCTTGAGTCCACCAAGATACCCAGAATGTATCACTCATCAGCAACTCTTCTTCCTGATGGGAGGGTCTTGGTTGCAGGTGGTAACCCTCATGGAAGGTACACTTTTCACAATGTGGCATACCCAACTGAACTGAGACTTCAAGCATTTGTTCCACACTATATGAACAAGATGTACCATAACTTGAGGCCAAGTAACATGACCATAGAATATGGTGGTGGCAGCAGCAACCATGCAATTGGGTATGGGAAAGAGTTTAGAGTTAGGTTCTTCCTAGAGAGGAGGCCTAGCAATGAGGTGGGGTTCAGCGCGTATGCACCGCCATTTACGACACATTCCTTTGCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAAGAGCTTGGAGAGAAGTGGTGGTGGGTGGGTAGGTTGCAGTCTTGGAAGCCCCTCCATCACCCAATGTTGCACCTTCTGGTTATTACTTGCTCACGGTTGTGAATGGTGGAATTCCAAGCATGTCTCAGTGGGTTCAGTTTGCACACGCCTAGGCTTGTCTTTGTTCAATACTTCAGTTCCAGAGTACTAA 2913 0.4535 MGGTISRRRRSRQHSSSNFIPRYQQPQFLQSQDNGSVGHYGYSSQSYGGGRAPEQAKSSDRKYSRIGDDYKSLDQVTEALANAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCHGFEEVLERYRELVPQLKLAGPTSFAPVIEMAITIVEQSGGQYHVLVIIADGQVTRSVDIEHGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMRKFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGTRRGKDIDRIPLPPPQYGAASFNSPKTSRQNSFRPSAPSSRHDVSPNPPATSAPDNHHVYLSLPSILMLEVCFVVHSGIQNFVPFASQILRIWRLVAGIRFSNGANVRSSEGRKGQWQLLLNNTGVVGMHVALTYKNTVIMFDQTGAGQSSYQLRRRFNGSKCTRSNHDLMDSSCYAHSVEYDISANRVRPLRLDTDPWCSSGGYEKGAKRVRLYRPCGNHQCDWIQSKKTLSDERWYASSQILPEHDRVVVLGGRRVFTYEFVPKTSPGEKSFDLPFLHQTNDRSAGGNNLYPFLHLSSDGNLFVFANRDSILLNLRRNKVIKTFPRIPGEGSRNYPSSGSSVLLPLDHRDNFQKVEVMVCGGSSTGALKAAGQGRFLEGLRSCGRMVITGNKNKWDMEYMPKPRLLHDMLILPTGNILIINGAKHGCAGYENARNASLEPYLYSPNKRLGKRFTVLESTKIPRMYHSSATLLPDGRVLVAGGNPHGRYTFHNVAYPTELRLQAFVPHYMNKMYHNLRPSNMTIEYGGGSSNHAIGYGKEFRVRFFLERRPSNEVGFSAYAPPFTTHSFAMNQRMLKLRCKSLERSGGGWVGCSLGSPSITQCCTFWLLLAHGCEWWNSKHVSVGSVCTRLGLSLFNTSVPEY 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01954 970 PANTHER SECRETED PROTEIN-RELATED 409 913 - -
Pumo10g01954 970 Gene3D - 437 842 IPR037293 -
Pumo10g01954 970 SUPERFAMILY E set domains 841 913 IPR014756 -
Pumo10g01954 970 MobiDBLite consensus disorder prediction 346 378 - -
Pumo10g01954 970 Gene3D Immunoglobulins 854 930 IPR013783 -
Pumo10g01954 970 SUPERFAMILY Galactose oxidase, central domain 525 836 IPR011043 -
Pumo10g01954 970 SUPERFAMILY vWA-like 89 271 IPR036465 -
Pumo10g01954 970 Pfam Glyoxal oxidase N-terminus 455 690 IPR009880 -
Pumo10g01954 970 Pfam Galactose oxidase-like, Early set domain 860 909 IPR015202 -
Pumo10g01954 970 MobiDBLite consensus disorder prediction 342 381 - -
Pumo10g01954 970 MobiDBLite consensus disorder prediction 16 52 - -
Pumo10g01954 970 Pfam Copine 112 326 IPR010734 -
Pumo10g01954 970 SMART VWA_4 87 290 IPR002035 -
Pumo10g01954 970 MobiDBLite consensus disorder prediction 1 62 - -
Pumo10g01954 970 CDD vWA_copine_like 66 316 IPR010734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01954 Pumo-Chr10 25724851 25731632 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01954 - - gmx:100814200 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01954 10 25724851 25731632 Pumo10g01954 10 25724851 25731632 ECH