Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01946 ATGAGCAGCCACACTCCTCGCCAGCTACCAGCTACCCCTAAGATGCAGCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACACTGCCATGACCAAGCAGGTTCAGGCCACTCATGCCCCTGATGGTCGTGAAATTGATGTCAAACCCATTCTCCAAATTGTAGATGAAATCTTGGTTCGGTTCATTGCTCGCACCGTTGAGGGTTATGAAGTAAAGCGAGATCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTATATCATAAACAAAATTTCGTGCGAGCTATCATGCAAGTGCTCGGGAGGTGGAGATGCACATTCATCAACGATGGTGTTACTGAATTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGTTAACCTTAGCTGCCTTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAATACACTTGCGAAGTCTGTGGCCCTCCTTAAGCAACTGCCTGACATTGCTGAGAATTTCATGTCCTTGAAACCCCATTTTGAGGCACTCATTAAGCTCGTGAAGGCGGCAATGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTGCCATCTGAGTACATTTCAGAGGATACTCCTCCTATGTCTGTTGCAAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCACAAATTGCTAGTCTCGTAGGCATGAGAAATGAGTCCATTTCATCAACCACAGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTTAGTAGTATATATGAGCACCTCAAGAACCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATTGAGGCCTTCCATAATCTGATACGGCTTTTCGAGACAGTCCATGTAGACAACATGAAAATTCTCAGAGCACTGATATATTTAAAGGATGATATCCTTCCACTTGTAGATGGAACAACAAAATCAAGGGTTAGTCTCGAGGTACTAAGGAGGAAAAATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAAATCCTGGTACTTGATAATTTGTACAAAGATGCACGAGCCAGGGGTGACACACACTATGAGATGGTATGGATCCCAATTGTGGACAAAGCGACCTGGAATGATGTGAGCAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGTACAGTGTCTGTGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACAGCTATTTTAGTTGCCCTTGATCCACAAGGCAGATTGTCCTCTGCTAATGCTGTCCATATGATATGGATTTGGGGAAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCATGTGGAAACAAGAGATTTGGAGCCTTGAGCTGCTTGTTGATGGAATTGATCCTACAGTTTTAGAATGGATGACAGAGGGAAAGCTGGTATGCCTGTATGGAGGCGAAGACCTGGAGTGGATTGAAAAATTCACAACAACAGCAATAAGCGTTGCAAAAGCTGGCAAGTTCGAGCTGGAGATGGCGTACGTGGGGAAGAGCAACGCGAAGGAGCGTATGCAGAAGATGATCAAGACCTTCGCCACGAGAAAGTTCAGCTACTTCTGGCCCAACGTGACATCCATATGGTTCTTCTGGACGAGGCTGGAGAGCATGCTGTACTCCAAGCTGCAGCATGGAAAGACGGTGGAGAACGACGAGATCATGAGCGAAGTGATGACCGTGCTCAGCTTCGATGGCAGCGATCGAGGCTGGGCCATCTTCTGCAGAGGCCCGACCGAGATGGCCAGAGCCAAGGGTGACAGTGCTCTGATATGTCTGCAGGATTTTGATAAGTGGAAGGACAGAATTGAGGAAGACGGTGTAGTGCCGGCAATGAACGATTATCTGAACAAAAACAAACCGCCACATCACTGCAACCGCTTGATCCTCCCAGGGAGCACTGGTGGCATACCACAGAAGGTTGTGTGTGCTGAGTGTGGCCGCCAAATGGAGAAGTACTTCATGTATCGCTGTTGTGTGGAGTAA 2115 0.4586 MSSHTPRQLPATPKMQQRKERRMFSTSDDTAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSLKPHFEALIKLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLVGMRNESISSTTEAWELSSLAHKVSSIYEHLKNQLVLCYQYIDDKRHIEAFHNLIRLFETVHVDNMKILRALIYLKDDILPLVDGTTKSRVSLEVLRRKNVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPIVDKATWNDVSKQKFEYLQSLMAWYSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSANAVHMIWIWGNLAFPFTSEKEESMWKQEIWSLELLVDGIDPTVLEWMTEGKLVCLYGGEDLEWIEKFTTTAISVAKAGKFELEMAYVGKSNAKERMQKMIKTFATRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGKTVENDEIMSEVMTVLSFDGSDRGWAIFCRGPTEMARAKGDSALICLQDFDKWKDRIEEDGVVPAMNDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01946 704 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 703 IPR039299 GO:0010088
Pumo10g01946 704 MobiDBLite consensus disorder prediction 1 29 - -
Pumo10g01946 704 Pfam Sieve element occlusion N-terminus 27 311 IPR027942 -
Pumo10g01946 704 Pfam Sieve element occlusion C-terminus 473 702 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01946 Pumo-Chr10 25657126 25662161 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01946 - - gmx:100811452 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01946 10 25657126 25662161 Pumo10g01946 10 25657126 25662161 ECH