Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01941 ATGGCTACGAGTGGAGGCGATGAGGGACAGAAACAGAACAACCCTGCCCTTGACCCGGATTTGGATACTCCGGATAACCCGGTTCACGAGTTCGCTGAGTTTGGATCGGGTTGCTTCTGGGGTGCTGAGTTGGCCTTTCAGCGAGTTGTGGGTGTGGTGAAGACTGAGGTTGGTTACACTCAGGGTTACACTCCGGATCCGGATTACAAACTGGTTTGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTCCAGTTCGATCCGAAGGTTTGCCCCTACACTGATCTACTCGCTCTCTTTTGGTCTCGACATGATCCCACTTCCATCAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTATTACAACGAGACCCAGGCTCGTTTAGCCCAGGAATCAAAAGATGCAAAACAGTTGGAATTGAAGGAGAAGATTGTGACAGAAATACTTCCAGCCAAGAGGTTTTACAAAGCAGAGGAATACCATCAACAATATCTGGAGAAGGGTGGAGGTCAAGGCAATAAACAATCTGCAGCAAAGGGCTGCACTGACCCCATCAGGTGCTATGGTTGA 591 0.4975 MATSGGDEGQKQNNPALDPDLDTPDNPVHEFAEFGSGCFWGAELAFQRVVGVVKTEVGYTQGYTPDPDYKLVCTGTTNHVEVVRVQFDPKVCPYTDLLALFWSRHDPTSINRQGNDVGAQYRSGIYYYNETQARLAQESKDAKQLELKEKIVTEILPAKRFYKAEEYHQQYLEKGGGQGNKQSAAKGCTDPIRCYG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01941 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 7 195 - -
Pumo10g01941 196 MobiDBLite consensus disorder prediction 1 26 - -
Pumo10g01941 196 Pfam Peptide methionine sulfoxide reductase 33 175 IPR002569 GO:0008113
Pumo10g01941 196 Coils Coil 128 148 - -
Pumo10g01941 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 29 186 IPR002569 GO:0008113
Pumo10g01941 196 FunFam Peptide methionine sulfoxide reductase 18 196 - -
Pumo10g01941 196 MobiDBLite consensus disorder prediction 1 19 - -
Pumo10g01941 196 SUPERFAMILY Peptide methionine sulfoxide reductase 29 177 IPR036509 GO:0008113
Pumo10g01941 196 Gene3D Peptide methionine sulphoxide reductase MsrA 19 196 IPR036509 GO:0008113
Pumo10g01941 196 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 31 174 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01941 Pumo-Chr10 25603987 25606015 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01941 K07304 - gmx:100527085 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01941 10 25603987 25606015 Pumo10g01941 10 25603987 25606015 ECH