Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01930 ATGGCAGCTACAAGTAGCATCATCTCCATCTCCTCTGCTTCACTCTTGACTCCAACAACAACACCTCAACCAAAAACCCAATGCCTCCTCAAACACAACAAGGACCATGATCAAGTTCCATCATCATCCTTCACAAAACTAACTGCTCTTAAGATATCAAGACCAACAACAACGTTAGGAATCTCTACAACCACAAGGGTTAACGTGCCTCCTCGTAGGTTGAGTTGTTCAGCATCCGCGTCTTCCTCTTCCACTCTTCCCTCAGCTCTTCTATTTGACTGTGATGGAGTCCTTGTGGATACTGAGAAAGATGGCCACCGCATATCTTTCAACCAAACCTTCCAAGAGAGAGAACTAGGCGTTACATGGGATGTGGACTTGTATGGAGAATTGCTCAAAATTGGAGGCGGAAAAGAAAGGATGACAGCGTACTTTAACAAGACAGGTTGGCCTGCGAATGCCCCAACAGGTGAACAAGAAAGAAAAGAATTCATAGCTTCACTCCACAAACAGAAGACAGAACTATTTATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGGCCTGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCAGCCATCTATCTATTAGCCGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGGAATGACATGTATAGTAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTCTTTGACTGCATAGGTGATCCTCCTGAGGAGAGGTTTGATTTGGCATTCTGTGGAAGCCTTCTTGAGAAGAAGCAATACGTGAGCTAG 984 0.4522 MAATSSIISISSASLLTPTTTPQPKTQCLLKHNKDHDQVPSSSFTKLTALKISRPTTTLGISTTTRVNVPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPTGEQERKEFIASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAGMTCIVTKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKKQYVS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01930 327 SUPERFAMILY HAD-like 88 305 IPR036412 -
Pumo10g01930 327 Pfam Haloacid dehalogenase-like hydrolase 90 277 IPR041492 -
Pumo10g01930 327 NCBIfam HAD-IA family hydrolase 169 277 IPR006439 -
Pumo10g01930 327 SFLD phosphoglycolate phosphatase 85 309 - -
Pumo10g01930 327 FunFam HAD family hydrolase 180 299 - -
Pumo10g01930 327 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 85 309 - -
Pumo10g01930 327 CDD HAD_CbbY-like 92 285 - -
Pumo10g01930 327 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 49 323 IPR044999 GO:0016787
Pumo10g01930 327 Gene3D - 89 302 IPR023214 -
Pumo10g01930 327 Gene3D Putative phosphatase; domain 2 101 185 IPR023198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01930 Pumo-Chr10 25459904 25465361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01930 - - pvu:PHAVU_009G169900g 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01930 10 25459904 25465361 Pumo10g01930 10 25459904 25465361 ECH