Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01924 ATGAACAAAGCATATGCTGCCATGTTTGCTCCATTTTGGAATGAGATAATTAAAAGCCTGCGCGAGGAAGATTTTATTAGCAATAGGGAAATGGACCTGCTTTCTATTCCTAGTAATGCAGGAAGTCTGAGATTAGTTCAATGGCCTTTATTTCTTCTAAGCAGTAAGATCCTGTTGGCGATTGATTTGGCTTTGGACTGCAAAGATACTCAGACAGATCTGTGGAACAGGATATGTAGGGATGAATATATGGCCTATGCAGTTAAGGAATGCTATTACAGTGTTGAAAAAATATTATATTCATCAGTTGACAGCGAAGGAAGACTTTGGGTGGAAAGAATTTTTCGTGAGATCAATAACAGTATTGTAGAGGGTTCGCTTGTTATAACCTTGTCTCTTAAGAAGCTTCCAGTTGTTTTATCAAGACTTACGGCATTGACTGGACTCCTGATTCGAAATGATCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTACATGACCTGTATGAAGTTGTTACTCATGAACTGGTATCTTCAGATTTAAGGGAGAATCTTGATACATGGAACATATTAGCTAGAGCTAGGGATGAGGGACGCCTTTTTTCTAGGATAGTATGGCCTAATGATCCCGAAATTAAAGAGCTTGTGAAGCGGTTGCATCTTCTTCTTACTGTAAAGGATTCTGCTGCTAACGTTCCGAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTCACAAATTCATTATTTATGGACATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCGTTCAGTATTTTCACTCCATACTATAGTGAAACTGTGCTTTATAGTACTTCTGAATTGCAAAAAGAGAACGAAGATGGCATATCTATTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAACTTTCTTGAAAGAATTGGTCGAGGAGCATCCACTGGGGATGCTGAACTTCAAGAAAGTTCCAGTGACTCTTTGGAACTTCGTTTTTGGGCTTCATATCGAGGGCAGACTCTTGCTAGGACAGTGCGTGGTATGATGTACTATAGAAGGGCTTTAATGCTGCAGAGCTTTCTGGAGAGCAGATCATTGGGAGTGGACAATTATTCTCAAAACAACTTCATTACAAGTCAAGATTTTGAATCATCTCGTGAATCACGGGCACAGGCAGATTTGAAGTTTACTTATGTTGTATCATGCCAAATTTATGGTCAACAAAAGCAGCGGAAGGCACCAGAAGCTGCTGATATTGCTTTATTGTTACAGAGGAATGAGGCACTCCGAGTTGCTTTCATTCATGTTGATGAAAGTACAACTGATGCAAATATTTCAAAAGTGTTTTATTCAAAGCTTGTCAAAGCCGATATAAATGGAAAAGATCAGGAAATATATTCTATTAAACTTCCTGGAGATCCGAAGCTTGGGGAAGGAAAGCCTGAAAACCAAAACCACGCCATAATTTTCACTCGTGGTGAAGCTGTTCAAACTATCGACATGAATCAGGACAATTATCTTGAAGAAGCAATGAAAATGAGGAATCTTCTGGAGGAGTTTAATGCAAATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTGAGGGAACATGTTTTTACAGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTTGCTTTGTAACCTTGGCCCAACGAGTTTTAGCGAATCCTCTCAAAGTTCGTATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCACATAACTCGAGGAGGCATTAGTAAGGCATCACGTGTTATTAATATTAGTGAAGATATATATGCTGGTTTCAACTCCACGTTGCGGCTGGGAAATGTCACACACCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAGGGGAAAGTGGCAGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATATTTACAGGCTTGGACAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTTCATTACAACTGTTGGTTATTATGTCTGCACCATGATGACAGTCCTTACAGTATATATATTCTTATATGGAAGAGCATACCTGGCATTTTCTGGTCTTGATGAATCTGTCTCAGAGAAGGCAAAATTGCAGGGTAACACAGCACTTGATGCAGCTTTAAATGCTCAATTTTTGGTCCAGATTGGCGTTTTTACTGCAGTACCAATGATAATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCTGTTTTCAGTTTCATCACAATGCAACTACAATTGTGCTCTGTCTTCTTCACGTTCTCATTGGGAACCAGAACTCATTATTTTGGACGTACCATTCTCCATGGGGGTGCAAAATATCGTGCTACTGGTAGAGGCTTTGTTGTTCGTCACATAAAGTTTGCTGAAAATTACAGACTATATTCTAGGAGCCACTTTGTCAAAGCGCTTGAAGTGGCATTACTTCTTATAGTTTATATCGCATATGGGTATGCAGAGGGAGGTGCTGTCACGTATGTTTTGCTAACTATTAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTTGCACCTTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTAGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGAGGAGTAGGGGTAAAGGGAGAAAATAGTTGGGAGTCTTGGTGGGACGAAGAACAGATGCATATCCAAACTTTGAGGGGTCGTATTTTGGAGACAATTTTGAGTGCAAGGTTCTTCTTGTTTCAATACGGTGTTGTGTATAAGCTGCATCTTACTGGAAACAATACATCACTTGCGATATATGGATTCTCATGGGTTGTCTTGGTTGGAATTGTCTTGATATTTAAGATCTTTACCTACAGCCCGAAAAAGTCTGCGGATTTTCAGCTAGTGTTGCGATTTTCACAGGGAGTTGCATCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCCTTTACTCAACTGTCAATAGCTGACCTTTTTGCAAGCATCCTTGCATTTATCCCTACTGGATGGGGAATATTATCCTTGGCAATTGCATGGAAGAAGGTAGTTTGGAGTCTCGGCTTGTGGGATTCTGTTCGTGAGTTCGCTAGAATGTATGATGCTGGAATGGGTATGATCATTTTTGCACCAATAGCATTTTTATCGTGGTTTCCATTCATCTCGACTTTCCAATCTCGCCTTCTCTTCAATCAAGCCTTCAGCCGTGGTCTTGAAATATCTATCATCCTTGCTGGAAATAAAGCTAATGTTGAGGCTTAG 3324 0.401 MNKAYAAMFAPFWNEIIKSLREEDFISNREMDLLSIPSNAGSLRLVQWPLFLLSSKILLAIDLALDCKDTQTDLWNRICRDEYMAYAVKECYYSVEKILYSSVDSEGRLWVERIFREINNSIVEGSLVITLSLKKLPVVLSRLTALTGLLIRNDPELAKGAAKAVHDLYEVVTHELVSSDLRENLDTWNILARARDEGRLFSRIVWPNDPEIKELVKRLHLLLTVKDSAANVPKNLEARRRLEFFTNSLFMDMPSAKPVSEMLPFSIFTPYYSETVLYSTSELQKENEDGISILFYLQKIFPDEWENFLERIGRGASTGDAELQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSFLESRSLGVDNYSQNNFITSQDFESSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEALRVAFIHVDESTTDANISKVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGEAVQTIDMNQDNYLEEAMKMRNLLEEFNANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETCFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFITTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDESVSEKAKLQGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLLTISSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGVVYKLHLTGNNTSLAIYGFSWVVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGVASIGLVAAVCLVVAFTQLSIADLFASILAFIPTGWGILSLAIAWKKVVWSLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNKANVEA 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01924 1107 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 5 1100 - -
Pumo10g01924 1107 Pfam 1,3-beta-glucan synthase component 232 1006 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Pumo10g01924 1107 Coils Coil 506 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01924 Pumo-Chr10 25375587 25395266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01924 1 1106 Glycosyltransferase AT2G36850 82.252 0.0 1887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01924 K11000 - gmx:100777959 2153.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01924 10 25375587 25395266 Pumo10g01924 10 25375587 25395266 ECH