Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01922 ATGGTTCTTTTGCTTTCAAGGAAGGATGGAGTGTTTTTTCATTGGATCATGGGCTTAAACGTTGGATATCTTCTGGTATTCAATTACGTTAAGGATTTGCACTTTGATGTCAAGATCTATGATCCATCTGCATGTGAAAAGCTTGATTTTTCTAAAACAAGAAATCGGAAGAAAAGAAGTAGGGGCAGAAGTGGCTCTCCAGTTAGAGATGGTATGTTGGTTAGACAAGAACCCAATGCCTTAGTTGTCTCCAAGCATCATGTGCCAAAAATGAAAAGCAAGCGCAGCAAGGTTGACTTAGTAGTACCACAAAATGGTAAAGAGAGTGGCCAACTTATGCGCGTATCAGAACACCGTGAAGACCCATGTTATTCGACAAGCCTAGAATTTGACCAGAGCCATGGTGTTGATGGGACCATGAAAGTTGCGAATGGAGATTTAAAAGTTTCTAATGTTGATTATGGATCCCATATATTTGTAAATGATGCAATTGTATGTAGTAAAGATACGTTTGAAGGGATATTCAGTACAGGAGCTGCCTTTGATATATCTGAACTTGAAATGTCTGGAAGAAGTACTTCTCTAGGTGAGGCAGACAAAAGCACACATGACAAGACTTCTACTTTGAAAATTAAAGAAAACAAAGATAGCAAAGCCATCATGTCCAACGGGGAAGCTCAAGAGTGCCAATTTTCCAATGGCTTAGAAAGTGATAAGGATTCAATATCCAAAAAGGAACCTGCTTTGCATATTGGTGGTTTTTGTGACACCAAACAGAAGTTCAATGGGATCTCAAATCTCTTAGAAGCTCATATTCACAATGGTGAAATGAAGAAAGTGCCTGTGGACATGGCTCCCAATTTGTGCAGTTCCATGGATAAATTGAATGTAACAGGGTTGCCAATGGAGACTAAGGGAGAGTTGGGTCACTATTCTGACACATTTAATCAAGATAACGAGGGTCACTTTAAAACTGCACCTCCTCAAGAGTGCCAATCTTCCAATGGCTTAGAAAGTGATCAGGACTCAATATCCAAAAAGGAACCTGCTTTGCATATCGGTGGTTTTTGCGACACCAAACAGAAGTTCAATGAGATCTCAAATCTCTTAGATGCTCATATACACAATGGTACATCGAAATCGCCAGTGGACATGACTCCCAAATTGTGCGGTTCCATGGATAAATTGAATGTAACAGGGTTGCTAAAGGAGATTAAGGAAGAGATGGACTCTGACTTATCTAATCAAGATAATGAGAGTCACTTTAAAACTGCACCTCCTCTCTCCTGTGTGGTGACCAATGATAATGTTTCCCTTAAATTGCCCAAATGCCTGCCTTTGGCTCGCTGGGTAAGACCATACCTGAATAAGAGGATGGTGGTGTTACTTCGGGATCCACTGAGGAGACTGTGGCCGGTCTTTTACCATGAACAACCGCGGTTACTGACACATGGATGGTTAGATTTTAGCAGAGCTAATAACATTCAACCAGAAGATGAGTGTATTTTTGAGGTTGAGCCTGACCCTGAAAGCAGGTATCAACGTATCTTAGCTGTAAGTATAGTCCACAAGTCATGA 1578 0.4075 MVLLLSRKDGVFFHWIMGLNVGYLLVFNYVKDLHFDVKIYDPSACEKLDFSKTRNRKKRSRGRSGSPVRDGMLVRQEPNALVVSKHHVPKMKSKRSKVDLVVPQNGKESGQLMRVSEHREDPCYSTSLEFDQSHGVDGTMKVANGDLKVSNVDYGSHIFVNDAIVCSKDTFEGIFSTGAAFDISELEMSGRSTSLGEADKSTHDKTSTLKIKENKDSKAIMSNGEAQECQFSNGLESDKDSISKKEPALHIGGFCDTKQKFNGISNLLEAHIHNGEMKKVPVDMAPNLCSSMDKLNVTGLPMETKGELGHYSDTFNQDNEGHFKTAPPQECQSSNGLESDQDSISKKEPALHIGGFCDTKQKFNEISNLLDAHIHNGTSKSPVDMTPKLCGSMDKLNVTGLLKEIKEEMDSDLSNQDNESHFKTAPPLSCVVTNDNVSLKLPKCLPLARWVRPYLNKRMVVLLRDPLRRLWPVFYHEQPRLLTHGWLDFSRANNIQPEDECIFEVEPDPESRYQRILAVSIVHKS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01922 525 ProSiteProfiles B3 DNA-binding domain profile. 461 525 IPR003340 GO:0003677
Pumo10g01922 525 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 19 520 IPR044837 -
Pumo10g01922 525 MobiDBLite consensus disorder prediction 311 342 - -
Pumo10g01922 525 Gene3D - 406 524 IPR015300 -
Pumo10g01922 525 CDD B3_DNA 431 504 IPR003340 GO:0003677
Pumo10g01922 525 SUPERFAMILY DNA-binding pseudobarrel domain 430 508 IPR015300 -
Pumo10g01922 525 MobiDBLite consensus disorder prediction 311 340 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01922 - - gmx:102661564 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01922 10 25342042 25345360 Pumo10g01922 10 25342042 25345360 ECH