Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01920 ATGGGGAAGAAGACGAAGAAGCCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCGAAAGCCGATGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCTCCCGAAGACGACATCGATGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCTAAGAAGAAGGAAGTCCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCCCTCACCGTCAATCCCTTGAAAGAGACCGAGTTGATTCTCTACGGTGGCGAATTCTATAACGGGAACAAGACCTTCGTGTACGGCGATCTCTACCGGTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCGAATAGTCCTCCTCCTCGCAGTGCTCATCAAGCCGTTGCGTGGAAGAATTACATTTATATTTTTGGTGGTGAGTTTACATCACCGAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACGAACCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGCTCAGGACATCGAATGGTAATATACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGACCTATTTGTATTTGACCTTGATCAATTTAAGTGGCTAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGGACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGACAAGAACTCCTCTGAGAAAGGAATTGTTCATGCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAGAAGTGGAATGCCTCCTGGACCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGAAGAGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAATCGACAAAAGATAAGTTAAAAAAAATTGAACAAAATTGTGCTGATGATGTCGACAAGAAGATAAATCCAGCTTGTCCAGCAAGAGAAGAAACTGAGGAGTCAGAGGATGAAGAAAGCAACATTGATGATATATCCAAGAATATAGCATCAAACATGTCTGTTGTTGATGGTGAATCGGTTACCAAATCTGAAGGAAAGCCCAAGGAATCTGGTGCTAAATTGGACATTCAAAGTCCTTTGCCCGAGGTAGTGAAGCCCTGTGGACGTATTAATGCCTGCATGGCCGTTGGAAGAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAATGCATTATACCGGTTTGTTATTTTTTCTTACAAATACATGCATACATGCTCTATACCATAGTTACAAATCCTAGATAG 1530 0.4216 MGKKTKKPGKGKEKTERKTAKADEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVIYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWLEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKEVSSDKNSSEKGIVHADMWSLDPKTWEWNKVKRSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCADDVDKKINPACPAREETEESEDEESNIDDISKNIASNMSVVDGESVTKSEGKPKESGAKLDIQSPLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPVCYFFLQIHAYMLYTIVTNPR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01920 509 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 487 - -
Pumo10g01920 509 Coils Coil 379 399 - -
Pumo10g01920 509 MobiDBLite consensus disorder prediction 12 35 - -
Pumo10g01920 509 MobiDBLite consensus disorder prediction 371 393 - -
Pumo10g01920 509 Pfam Galactose oxidase, central domain 135 186 - -
Pumo10g01920 509 Pfam Galactose oxidase, central domain 446 486 - -
Pumo10g01920 509 Pfam Galactose oxidase, central domain 68 122 - -
Pumo10g01920 509 SUPERFAMILY Kelch motif 82 488 IPR015915 GO:0005515
Pumo10g01920 509 MobiDBLite consensus disorder prediction 1 35 - -
Pumo10g01920 509 Gene3D - 42 370 IPR015915 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01920 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 8.62e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01920 - - vum:124844811 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01920 10 25316545 25322499 Pumo10g01920 10 25316545 25322499 ECH