LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g01914	ATGGAGGAGGGTTCAGAGAAGAGAGAATTGGAAGGTGAGGTAGTTACCAAGGTTGCCGAAGTGATTTCGGCTATAAAGAATGCGAAGCACGTTGATCAAGTCATTTGCGCGCTTCATTCCATAGCCACCCTTCTCTTCCCCCTTGACTCTTCACTCCTCTCAGATAGCATCGATGATAGTTACCGAGACCAGGTCTTCAGTGTCGAAGTTCATTCTGCAGAAAAACGACATGGTTGGTGGCACGCGTTTTATCGAGGAGCTGCTTTTCCTACATTGGCTAGGTTTCTATTACTTGATGTTGCCTCGAACTGGTTGGGTTGTTTTCCCTTTTTGGCGCAGAAGTATGTTTATGACGTTTTCTTTGTTCGTGGATTGGTCACTGAGGTGCTGCAGATTTTGGTTCCTTTTCTCCAGATGAGTGCGAGTGATGGTCTTGATGTTAATGCTGTCCTCTCTAATTCCGAAAGATTGCTTGTACTGTGCTTGCTTGAAAATAATGGGGTGCTCGAGTTAGCAAGAGAGTTTGGTGGTTCTTCTAAATCGAAAAGCGTTACAGATGTACAGATCAAGATGGATGTATCTAGGGTGGCACAGATTGTTGCATCTATTCCTGACAAAGCAAGGATGAACTCCACGACTTCATTGTCATCACATGTGTTCTTCAAGCAGATTGTTGTCCAACTACTCTCCCTGGTGGAAGAAAGAGAGATGATGTTGCTAGACAATGTAATGGATGAAATGGACAAAAATGGTGCACTGTTATTTGTAGGGGAAATGTTTTCTCGCATTTGTCGCCGTGGCTCTGCTGATCTCCTAACTAGTGAATTAATACCAGAAGTTCTAAGGCTTGTCAACAGCCTCTTATCATCAAATAATGATTCAGTTACTAAGGAATTGTTTGAGTCAAAACCAGACATGGTATTTTGGTCGAGAATAATGGAATCCATCAGTGATCCATATACCACGGAAAGAATCTCTGAGCTGATTTTGCATAAGTTAGCTACTCAAGATGCAAATGATGTTCAAGCGTATTGGGTGCTGTGGTTGTTATTCCGTCGAATTTTTAAGCTTCAGGCTTCTGTCAGGTCTATGTTTGTTGACAAATTCCTGCTATGGAAAGTATTCCCTATTAGCTGCCTGAAATGGATCCTTCAATTTGCTGTTCATGAATGCCCTCCTGGTACCTCATTATCAGGACATAATCGCCCTGGGCTTTTGAATTCTGTCCAACGTCTGGTCGCAGTATGGTCTAAGAAAGAATTTGTGCAAACAGCCCCTATTGAGCAACAAGCTTACATATCTGCTGCACTAGGCCTTTCTCTGGAGACAATGTCTAAGGAGGAATTGGATGGGACAAAGAATGTCATGCACTTGATTCTTCAAGGAGTTAGCTGTAGGCTGGAGAGTCCTAATCATTTAGTTCGAAAAATGGCTAGTTATGTTGCTTTGGCATTGTCTAAAATTATTGATCCAAAGAATCCTCTGTACCTTGATGATAGCTGCAGCGGGGAGACAATTGATTGGGAATTTGGATTCATTATCCCCAAGAAAGGGAATCTGGCTGCCTCAAATTGTGGAGGAAAAGGTGTTGAGGGGACAGAAATATCTACTGTGTCAGGTCCAGAGAGGGACTCTGCTTCCCCTTCCAATGAAGAGAAAAGTATTCATGTAAAGGGTAAAAAGAAGTTATTGGACTTTAATGAGCTTGATCCAGATGAGATTATTGATCCAGCATCACTGAATCTTGAATCAGACGATAACGATGAGGATGTTGACGATAGTGCAAGCGAGAATTCATATTCTTCAAGTGATTCATCTTTACAGCCATATGATTTGTCAGATGATGACTCAGATTTGAAAAGAAAAATTTCACAGTTAGCTGATGTAGTTGCAGCTCTTAGAAAATCTGATGATGCCGATGGGGTGGAAAGGGCTATTGATGTAGCTGAAAAGCTCATAAGAGCATCCCCAGATGAACTAAAACATGCAGCACGGGATCTGACCAGAACTCTTGTTCAGGTTCGTTGCTCTGATATAGCCTTAGAAGGTGCAGAAGAATCAACTGAAGACAAAAGACAAAGAGCATTAGTTGCCTTAGCAGTCACCTGCCCATTTGAATCACTTGAGACACTAAACAAGCTTTTGTATTCACCTAATGTAGATATCAGTCAGCGCATTATGATACTAGATGTCATGACAGAAGCAGCTCAGGAGCTTGCTGAATCAAAAATTATGAAACCCAAACATCAGACTAGTTCCCTTATTTCAGTTGTTTCAGATACCCGACCTTGGTTCCTACCTAGCAGCACAGGGACTCCTGGAGCTGGTTCCTGGAAAGAGATCTCAGGTACTGGCTCTTTTTTGAATTGGTCAAATAGCTATGAGAGGGAACTTCCCCCAAAACCTAATCAGGTCAAGAAAGGGAAAACACGTCGGTGGAGCCTACAATCTCCCGCACAACAAAACCAGATGGAGTATTCTCATAATAAGTTTCCCATGTATGCTGCTGCATTCATGCTTCCTGCCATGGAGGGATATGATAAAAAAAGGCATGGTGTTGACTTGCTTGGCAGGGATTTTATTGTCTTGGGGAAACTCATTTACACGCTTGGGGTCTGTATGAAATCTGTAGCCATGCATCCAGAAGCTTCTGTGCTGGCTCCTTCCCTCCTGAATATGTTAAGATCCAGAGAGGTATGCCATCACCAGGAAGCATATGTGAGAAGAGCTGTCCTTTTTGCAGCTGCATGTGTATTGGTTGCCCTTCATCCTACTTACATTTCATCCGCCTTACTCGAAGGAAATGTTGAAATTTCGACTGGCCTTGAATGGATTCGCACATGGGCACTTGATGTAGCTGAGTCAGACACAGATAAAGAATGCTATACGATGGCTATGACATGTATACAACTCCATGCCGAGATGGCTCTTCAAACTTCCCGAGCATTGGAGTCAGTAAGAAGTTCACTCAAGGCAGGTCCTGTTCTTCCTTCTGATGCATCCAAAGTGACCATTAAAATTCCCTACTTAAATGGGGATTAG	3042	0.4277	MEEGSEKRELEGEVVTKVAEVISAIKNAKHVDQVICALHSIATLLFPLDSSLLSDSIDDSYRDQVFSVEVHSAEKRHGWWHAFYRGAAFPTLARFLLLDVASNWLGCFPFLAQKYVYDVFFVRGLVTEVLQILVPFLQMSASDGLDVNAVLSNSERLLVLCLLENNGVLELAREFGGSSKSKSVTDVQIKMDVSRVAQIVASIPDKARMNSTTSLSSHVFFKQIVVQLLSLVEEREMMLLDNVMDEMDKNGALLFVGEMFSRICRRGSADLLTSELIPEVLRLVNSLLSSNNDSVTKELFESKPDMVFWSRIMESISDPYTTERISELILHKLATQDANDVQAYWVLWLLFRRIFKLQASVRSMFVDKFLLWKVFPISCLKWILQFAVHECPPGTSLSGHNRPGLLNSVQRLVAVWSKKEFVQTAPIEQQAYISAALGLSLETMSKEELDGTKNVMHLILQGVSCRLESPNHLVRKMASYVALALSKIIDPKNPLYLDDSCSGETIDWEFGFIIPKKGNLAASNCGGKGVEGTEISTVSGPERDSASPSNEEKSIHVKGKKKLLDFNELDPDEIIDPASLNLESDDNDEDVDDSASENSYSSSDSSLQPYDLSDDDSDLKRKISQLADVVAALRKSDDADGVERAIDVAEKLIRASPDELKHAARDLTRTLVQVRCSDIALEGAEESTEDKRQRALVALAVTCPFESLETLNKLLYSPNVDISQRIMILDVMTEAAQELAESKIMKPKHQTSSLISVVSDTRPWFLPSSTGTPGAGSWKEISGTGSFLNWSNSYERELPPKPNQVKKGKTRRWSLQSPAQQNQMEYSHNKFPMYAAAFMLPAMEGYDKKRHGVDLLGRDFIVLGKLIYTLGVCMKSVAMHPEASVLAPSLLNMLRSREVCHHQEAYVRRAVLFAAACVLVALHPTYISSALLEGNVEISTGLEWIRTWALDVAESDTDKECYTMAMTCIQLHAEMALQTSRALESVRSSLKAGPVLPSDASKVTIKIPYLNGD	1013

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g01914	1013	Pfam	Telomere length regulation protein	625	736	IPR019337	-
	Pumo10g01914	1013	MobiDBLite	consensus disorder prediction	596	612	-	-
	Pumo10g01914	1013	MobiDBLite	consensus disorder prediction	577	615	-	-
	Pumo10g01914	1013	Gene3D	-	618	757	IPR038528	-
	Pumo10g01914	1013	PANTHER	TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER	4	996	-	-
	Pumo10g01914	1013	MobiDBLite	consensus disorder prediction	798	819	-	-
	Pumo10g01914	1013	MobiDBLite	consensus disorder prediction	532	554	-	-
	Pumo10g01914	1013	FunFam	Embryo defective 2423	618	754	-	-
	Pumo10g01914	1013	SUPERFAMILY	ARM repeat	220	921	IPR016024	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g01914	K11137		-	gmx:100779550	1731.84

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo10g01914	10	25243488	25251406	Pumo10g01914	10	25243488	25251406	ECH