Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01904 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCAGAAAGTACTCTCATTCACAGAATATGGGGAAATCTAGGAAATACTCTAAAGGTTATGCTACTGGCTTTGTTCCTGATTTTCGGCATGCTGTTGAGACTATGGGTGAATCAGAAGGGTTGGGTAGCTTGGGAAGGGTTGATACGGAGCTGACGGCATCGGCAGATTCTTGTGCAGCGAAGAGGAAATGCCCTGGCTTGAATGCTGGTGGTTATGGTAGTTTTGATGTACCATTTCAACTTTTCTCATTATCGACGATGTCAGGTTTTGAGAGAAAGGATTTGAAACTGAGGCTAACTTGGGAACTTGAACAAGTAAGGGAATTTCAGAAGAAAATTGATGGTATGAACTCAAATGTTGTTGGATTGTCTCCCTCCAGTGACATAAGGAGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCATAGGACAATGGAAGTATCGGTGCCACATGGTAAGAAAAGGCCCTTACCAGGACATAATGGTCCCAAGACAAAGAAAAGTATGTCTGGGCGTTTTGAGTATGCAAAACCTGCTGCACCAGTGACTTCATATGCTACGTTGATGAAATCGTGTGAGAATTTACTTAACAGATTGATGTCTCATCAATTTGGTTGGGTTTTTAACACTCCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCACTGTCATCAAGCATCCAATGGATTTGGGTACTGTCAAGAGGAGAATAACCTCTGGCGAATATTCAAATCCCATGGATTTTGCTGCTGATGTGCGGCTGACTTTCAAAAATGCAATGACTTATAATCCAGCTGGCAATAATGTACACATCATGGCAGAGACCCTTAGTAAATATTTTGAAACAAGATGGAAGGCCATAGAGAAGAAAATTCCTGTTATTGATCGTGTCCCATCTGAGCCTTCAAGACCTACTCGCGTGGAAACAGAAATTTCTGACCGAGTTCCTCCCACAAAAAAGAAGAAAATAACACCAAATGACACTAATGTCAAGCCAGAGCCTGTTAAAAGAATCATGACCGTAGAAGAGAAGCAAAAATTGAGTTTAGAGTTGGAGGCAATGCTTGGAGAGCTGCCTGATAGCATTGTTGATTTCTTGAGAGAGCAAAGTTGTAATGAAGGGCAGACCAATGACGATGAAATTGTGATTGATATTGATGCTCTTAGTGATGATACCTTGTTCAAACTGCGGAAGCTTCTTGATGATTATACGCTGGAGAAGCAAAAATCCCAGGCAAAAGCTGGACAATGTGAAACGGAGCTTCTGAATGAATCAGGGTTCAGCAATTCATCAATGCAACCTTGCAAAGGCAATGAACAGGTTGAGGAGGATGTGGACATTATTGGTGGGAATGATCCTCCTATTTCAAATTATCCTCCATTAGAGATTGAAAAAGATGGTACCAATATAAACAGTAAATGCAGTAGTTCGAGCAGCTCTAGTAGTGAATCTGGCTCTTCATCCAGTGATTCAGACTCAGGTAGTTCGTCTGGTAGTGAGTTGGATATGGCTAAAACATCAGAACCTCTTAGTGCCACCAAGGAAAACGTAGGATCTGGCTTGACTTCAGATCAAAACAAAGGGGATCCTGGTAATTCAGAAACTGGAAAGGATTCAACAAATGTGGGAGGCCAAGTTGAGCAGAGTTCCCAGAGTAAGCCTGTTTCTACTGAGCCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCACCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGGTTTGCTGACACTATACTTAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAGCGAGATCCTGAAAAACTTAGGATAGAGCGAGAAGATCTTGAAAGGCGGCAGAAAGAAGAGAAAGCTCGGTTGCAGGCAGAGGCAAAGGCTGCAGAAGAGGCTCGGAGGAAAGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGGAAAAGGGAACTGGAAAGAGAAGCAGCCCGCCAGGCTTTGCAAAAGATGGAGAAAACTGTTGATATCAACGAGAGCAGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGCTGTACATGATGAACGTCTGCCAAGTTTCAAAGAGGAGACAAGCGCAGATCAACCTCAAAATGGATTGGGTGGGATCAAGCTACAGGGAAATCCCTTAGAACAGCTAGGGTTGTACATGAAGGATGATGAGGAGGAGGAGGAGGAGGAAGAAGAGGAACTGCCTCCGAGTGGTGCTGCAGGACCATCAAATGATGTGGAAGAAGGAGAAATTGATTGA 2346 0.4369 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKGYATGFVPDFRHAVETMGESEGLGSLGRVDTELTASADSCAAKRKCPGLNAGGYGSFDVPFQLFSLSTMSGFERKDLKLRLTWELEQVREFQKKIDGMNSNVVGLSPSSDIRSCSAGQKRPKLESQHRTMEVSVPHGKKRPLPGHNGPKTKKSMSGRFEYAKPAAPVTSYATLMKSCENLLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKRRITSGEYSNPMDFAADVRLTFKNAMTYNPAGNNVHIMAETLSKYFETRWKAIEKKIPVIDRVPSEPSRPTRVETEISDRVPPTKKKKITPNDTNVKPEPVKRIMTVEEKQKLSLELEAMLGELPDSIVDFLREQSCNEGQTNDDEIVIDIDALSDDTLFKLRKLLDDYTLEKQKSQAKAGQCETELLNESGFSNSSMQPCKGNEQVEEDVDIIGGNDPPISNYPPLEIEKDGTNINSKCSSSSSSSSESGSSSSDSDSGSSSGSELDMAKTSEPLSATKENVGSGLTSDQNKGDPGNSETGKDSTNVGGQVEQSSQSKPVSTEPESHQEGESAAPKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDERLPSFKEETSADQPQNGLGGIKLQGNPLEQLGLYMKDDEEEEEEEEEELPPSGAAGPSNDVEEGEID 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01904 781 Gene3D - 192 315 IPR036427 GO:0005515
Pumo10g01904 781 MobiDBLite consensus disorder prediction 713 781 - -
Pumo10g01904 781 PANTHER TRANSCRIPTION FACTOR GTE8 186 762 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 141 186 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 153 167 - -
Pumo10g01904 781 ProSiteProfiles NET domain profile. 348 430 IPR027353 -
Pumo10g01904 781 SMART bromo_6 198 308 IPR001487 GO:0005515
Pumo10g01904 781 MobiDBLite consensus disorder prediction 465 595 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 487 582 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 618 683 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 317 346 - -
Pumo10g01904 781 FunFam Transcription factor GTE4 181 316 - -
Pumo10g01904 781 Pfam Bromodomain 209 293 IPR001487 GO:0005515
Pumo10g01904 781 Pfam Bromodomain extra-terminal - transcription regulation 358 420 IPR027353 -
Pumo10g01904 781 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Pumo10g01904 781 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Pumo10g01904 781 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Pumo10g01904 781 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Pumo10g01904 781 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Pumo10g01904 781 MobiDBLite consensus disorder prediction 749 764 - -
Pumo10g01904 781 MobiDBLite consensus disorder prediction 317 350 - -
Pumo10g01904 781 Coils Coil 742 762 - -
Pumo10g01904 781 Gene3D - 352 430 IPR038336 -
Pumo10g01904 781 SUPERFAMILY Bromodomain 183 311 IPR036427 GO:0005515
Pumo10g01904 781 Coils Coil 635 692 - -
Pumo10g01904 781 CDD Bromo_plant1 205 303 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01904 Pumo-Chr10 25110220 25115386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01904 - - gmx:100776368 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01904 10 25110220 25115386 Pumo10g01904 10 25110220 25115386 ECH