Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01901 ATGGTGAAGCTAGACACCTACGCCGTCGCTTCCGATTTCATCGATTTCCTCAACGCTTCTCCAACGGCTTTCCACGCCGTCGACGAGGCCAAGAAGCGTTTGCGAAGCGTTGGGTACCACCAACTCTCCGAGACCGAACTGTGGGATCTGCAACCCGGCAACAAGTACTTCTTCACCAGGAATCACTCCACCATCGTCGCCTTCGCTATCGGCAAAAAGTACGTTGCTGGAAATGGATTCTACATAGTTGGGGCTCATACGGATAGCCCTTGTCTCAAACTCAAGCCTGTCACCAAGGTGGTCAAGGGTGGAATTTTGGAGGTTGGTGTCCAAACCTATGGAGGTGGTTTGTGGCACACGTGGTTCGATCGAGACTTGACCGTAGCGGGGAGGGTCATTGTGCGGGAAGAGAAGGCCGGTTCTGTTTCGTACTCGCACCGCCTTGTTAGAATTGAGGAACCTATAATGCGGATCCCGACTTTGGCAATTCACTTGGACAAGACTGTTAATGATGGATTCAAATTTAACAATGAGACTCACCTTATTCCCATTTTGGCAACATCGCTGAAGGGTGAGCTCAATAAAGTGTCCTCTGAAAATGGTCCCGTTGAAAGTGGAAATCAGACCGATGGAAAGAAAGCAAATACAAAGCACCACCTTCTTCTTCTACAGTTGCTTGCAAGTAAGCTTGGGTGTGAACCAGATGACATATGTGATTTTGAATTGCAAGTTTGCGATACACAACCAAGTACTATTGCTGGAGCTGCAAAGGAATTCATTTTTTCAGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCGCTGAAGGCATTAATAGATGCTACATCTTCTGACAGCAGTCTTGAGGAAGAGTCGGGCGTTAGAATGGTGGCTTTATTTGACCATGAGGAAGTTGGATCTAACTCTGCACAAGGAGCTGGCTCTCCTGTTATGCTAAATGCTGTGACTAGGGTTACCAATTCCTTCAGCTCAAATCCAAACCTTCTGGAGCAAGCAGTACAGAGAAGCTACCTTGTATCTGCCGATATGGCACATGGTCTGCACCCAAATTACATGGACAAGCATGAAGCAAACCATCAGCCCAAACTACACGGAGGACTTGTCATTAAAACCAATGCAAACCAACGCTATGCAACCAATGTTGTCACATCCTTCCTATTCAGGGAGATAGCATCAAAACATAACCTTCCGGTTCAGGACTTTGTGGTGCGCAATGACATGGCATGTGGTTCAACCATTGGTCCTATTCTTGCTAGCGGCGTAGGTATTCGCACTGTCGATGTAGGTGCACCGCAGTGGTCAATGCATAGCATACGAGAGATTTGTGCTGTTGATGATGTGAAGTATTCATACGAGCACTTCAAGGCCTTTTACCAAGAATTCTCTCATCTCGATGGTAAGATGGTCGTGGACATATAG 1440 0.4701 MVKLDTYAVASDFIDFLNASPTAFHAVDEAKKRLRSVGYHQLSETELWDLQPGNKYFFTRNHSTIVAFAIGKKYVAGNGFYIVGAHTDSPCLKLKPVTKVVKGGILEVGVQTYGGGLWHTWFDRDLTVAGRVIVREEKAGSVSYSHRLVRIEEPIMRIPTLAIHLDKTVNDGFKFNNETHLIPILATSLKGELNKVSSENGPVESGNQTDGKKANTKHHLLLLQLLASKLGCEPDDICDFELQVCDTQPSTIAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDSSLEEESGVRMVALFDHEEVGSNSAQGAGSPVMLNAVTRVTNSFSSNPNLLEQAVQRSYLVSADMAHGLHPNYMDKHEANHQPKLHGGLVIKTNANQRYATNVVTSFLFREIASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQWSMHSIREICAVDDVKYSYEHFKAFYQEFSHLDGKMVVDI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01901 479 CDD M18_DAP 10 466 - -
Pumo10g01901 479 FunFam Aspartyl aminopeptidase 1 91 249 - -
Pumo10g01901 479 Gene3D Aminopeptidase i, Domain 2 91 249 IPR023358 GO:0004177
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 80 96 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 300 318 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 343 359 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 432 447 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 152 169 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 113 133 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 SUPERFAMILY Zn-dependent exopeptidases 7 466 - -
Pumo10g01901 479 SUPERFAMILY Aminopeptidase/glucanase lid domain 92 243 - -
Pumo10g01901 479 Gene3D Zn peptidases 12 465 - -
Pumo10g01901 479 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 465 IPR001948 GO:0004177|GO:0006508|GO:0008270
Pumo10g01901 479 PANTHER ASPARTYL AMINOPEPTIDASE 7 478 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01901 Pumo-Chr10 25083892 25088669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01901 K01267 - gmx:100781379 904.049