Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01887 ATGGCACCGCACGATCTCCGCCGTCCGTTCAAGCGACCGGCGATCTCCGATCAAGAGCGGCGCAGGGAACAGTCTCTGCTCCGGCAGGCACAGAATCGCCAAAACGCCCAGCGCCACTCGCGCTTCTTAGCCTCCACCGCGCTCTCTCTCCCACCCCAAACCTCCGAGCCAGAATCCGAACCCGAACCCGAGCTCGAACTCCTGGAAGCCGAATCCGAAGCCGGTTCGAACTCACTCGAGAGCCTCGACGTGCTCGGAGCCTCGAAGCTGAAAGCCGCTGAAGCTCGCAAGTGGTTCGCGAAACAGCTCATGCTCCCCGAGTGGATGATTGACATCCCCAACAATCTCTCCCAAGACTGGTTCGTGTTCGCTCGCCCTTCCGGGAAACGGTGTTTCGTCGTTTCGTGTAACGGAACCACGATAAGCCGTTTGCGGAACGGTTCCATTCTGCATCGGTTTCCCTCCGCCTTGCCGAGCGGGGCAAGGAAGAAGGACCCCTCCTACTCTATACTGGACTGCATCTTTCACGAGGTGGATCAGACTTATTACGTTATTGACATGGTTTGCTGGCGGGGTTACCCTCTGTCCGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGAATTCCAAGCTTGCAGAGACTGGTGCCTTTGACCCTCCCTCGTATTATCACAAGTATAGGTTCAGTTTGGTTCCTGTGTATAGTTCTGACTCCAACGGTCTCTATGCTGCTTATACGGCACCGGTGCCTTATGTCAAAGACGGTCTTCTCTTTTATAACAAGCATGCTCACTACCAAGCAGGAATTACGCCGTTAGCATTAGTTTGGAAGGATGAGAACTGTAGTCAATATGTTATGGACACAGACAGTAAAGGACAGGTTCCAAACCAACAGCAGGTGGTTTTAGAGCTTCAAGAAGATGGAAAACTGACCACCTCAGATGATCCTCCTGTAGTATTTGGCTGTTTAGATGGAAGCTTTATACAACAGTCAGGGCTGCATTCAGGATGTCTTCTACGGTTTTCAATTGGAGAGGGAGGATTAGTTTTGATGGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTGGCAAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTGTAAGGGAATATTTCAGCAAAGCTCTAAACTTTTTTGCAACTTTTCCTTTCATTTGGACTAACATTTTACTCTGGATGTATTGTATATGA 1227 0.5029 MAPHDLRRPFKRPAISDQERRREQSLLRQAQNRQNAQRHSRFLASTALSLPPQTSEPESEPEPELELLEAESEAGSNSLESLDVLGASKLKAAEARKWFAKQLMLPEWMIDIPNNLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSALPSGARKKDPSYSILDCIFHEVDQTYYVIDMVCWRGYPLSDCTAEFRFFWLNSKLAETGAFDPPSYYHKYRFSLVPVYSSDSNGLYAAYTAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFIQQSGLHSGCLLRFSIGEGGLVLMDGKLEKADLHYLGKANRARASADSFSKVVREYFSKALNFFATFPFIWTNILLWMYCI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01887 408 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 383 IPR017336 GO:0005634|GO:0005737|GO:0061015
Pumo10g01887 408 MobiDBLite consensus disorder prediction 28 55 - -
Pumo10g01887 408 CDD Snurportin-1_C 98 279 - -
Pumo10g01887 408 Gene3D DNA ligase/mRNA capping enzyme 2 304 - -
Pumo10g01887 408 MobiDBLite consensus disorder prediction 1 27 - -
Pumo10g01887 408 MobiDBLite consensus disorder prediction 1 64 - -
Pumo10g01887 408 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 98 277 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01887 K13151 - gmx:100801927 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01887 10 24914272 24919624 Pumo10g01887 10 24914272 24919624 ECH