Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01867 ATGGGAGGTGGCAAACCCAGATCCTCCATTCTCATGTTCCTTCTATTTGTGTTCCTTTGTGTTTTTGCAACGGCACAACAACAGCAACCTATAAAAACCGTTGTTGTTTTGGTCATGGAGAACCGTTCCTTTGACCACATGCTGGGGTGGATGAAAGAGAGCATCAACACATTAATCAATGGGGTCACAGGAGATGAATGCAACCCGGTTTCCACCAAAACTCCAAGGAAAGATTCAATTTGCTTCACTGATGATGCGGAGTTCGTGGATCCGGATCCGGGGCATTCATTTGAGGATGTGTTGCAACAGGTATTCGGTTCTGGTTCCATCCCTTCCATGAATGGATTTGTGGAACAAGCATTGTCCATGTCTCAGAACCTCTCTGAGACTGTGATGAAAGGGTTTAAGCCAGGGTCTGTGCCGGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCGGGTCCAACACAACCCAATAGGCTTTTTGTGTACTCAGCAACCTCTCATGGTTCAACAAGTCATGTCAAGAGGCAGTTAGCAAAAGGGTATCCTCAAAAAACCATCTTTGATTCTCTGCATGAGAATGGCCTAGACTTTGGGATTTACTTTCAGAACATACCCACAACTCTGTTCTATAGGAACCTAAGGAAATTGAAGTACATATGGAAGTTCCATCAGTATGATTTGAAGTTCAAGAGAGATGCCAGAGATGGGAAGCTTCCACCCTTGACTGTGATTGAGCCTAGGTACTTTGACTTGAAGGGCATACCCGCCAATGATGACCACCCGTCTCATGATGTTGCACATGGGCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTAAGAGCAAGCCCTCAGTGGAATGAAACACTTTTCATCATTACATATGATGAACATGGTGGATTTTTTGATCATGTGAAGACCCCTTTTGTCAACATTCCTAATCCAGATGGGAACACCGGACCTGCTCCCTATTTCTTCAAGTTTGATAGGTTAGGGGTTCGGGTGCCAACTATTATGATCTCTCCTTGGATCAAGAAAGAGACTGTGATAAGTGGCGCCAAAGGACCTGCTGAAAACTCAGAATTTGAGCACTCTTCTATTCCTGCAACCATAAAGAAGATCTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGGACATTTGAGCATGTTGTTGGGGAGTTAAGTTCACCCAGAACAGATTGCCCAGTGACTTTGCCGGATGTGACACCTCTAAGGAGCACTGAAGCAAAAGAAAATGCTGGCCTATCTGAGTTTCAGAGTGAGGTAGTTCAATTGGCAGCTGTTCTTAATGGGGACCATTTCTTGAGCAGTTTCCCTGATGAAATGAGCAAGAAGATGAGTGTGAAGGAAGCTCATGAGTACGTTCGAGGAGCTGTTTCGAGGTTCATAAGAGCCAGCAAAGAGGCAATCAAGTTAGGGGCTGATGAGTCTGCTATTGTGGATATGAGATCCTCTCTCACTACTAGATCTTCAGTTCATAATTAA 1548 0.4425 MGGGKPRSSILMFLLFVFLCVFATAQQQQPIKTVVVLVMENRSFDHMLGWMKESINTLINGVTGDECNPVSTKTPRKDSICFTDDAEFVDPDPGHSFEDVLQQVFGSGSIPSMNGFVEQALSMSQNLSETVMKGFKPGSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSLHENGLDFGIYFQNIPTTLFYRNLRKLKYIWKFHQYDLKFKRDARDGKLPPLTVIEPRYFDLKGIPANDDHPSHDVAHGQMLVKEVYEALRASPQWNETLFIITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMISPWIKKETVISGAKGPAENSEFEHSSIPATIKKIFNLSSNFLTHRDAWAGTFEHVVGELSSPRTDCPVTLPDVTPLRSTEAKENAGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSVHN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01867 515 Gene3D Alkaline Phosphatase, subunit A 22 193 IPR017850 -
Pumo10g01867 515 Gene3D Alkaline Phosphatase, subunit A 261 434 IPR017850 -
Pumo10g01867 515 FunFam non-specific phospholipase C6 22 193 - -
Pumo10g01867 515 SUPERFAMILY Alkaline phosphatase-like 148 385 IPR017850 -
Pumo10g01867 515 Pfam Phosphoesterase family 31 386 IPR007312 GO:0016788
Pumo10g01867 515 FunFam Non-specific phospholipase C1 247 434 - -
Pumo10g01867 515 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 25 486 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01867 Pumo-Chr10 24690207 24693532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01867 26 510 Acyl Lipid Metabolism Gene Families AT3G48610 82.341 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01867 K01114 - gmx:100786332 1005.36