Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01860 ATGGCGGCAATCAACAACATCGGTTTACATTTTCTAGGGAATTTAAGCGATGCAAAGAAGGATAATGTTTTGAGGCCTAGTTTTTATTCTCCATGCAACACTACTAACATGTCTAATAATAAACGAAGATTTTTGTCTGTGAGTGCAAGCTATAATGATAGTCCTCGAAAAATGGACACCGCGAATAGAGTGAATGTGAATGGAATACATGTGGTAGAGGCTCCTCTACAAGCAGGAAAATTGGCAAAGGAAAGTGCAGCAGATGAAGCTATTGTTACCAGCTTGCGTGGAAGGTTTGTGGAGGGTAAGTTGGTATTTAGGCAAATTTTTGTTATCAGGTCTTATGAAATTGGACCAGATAAAACTGCCACAATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTCACCTGCTCTGGGATTGGTGGAGGCGGATTTGGAGCAACCCGCGAGATGAGCCTTCGAAAACTCATTTGGGTTGTTACTCGTATTCAAGTTCAAGTGCAAAGATATAACAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTCGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGTTAATCAGGGATCACTACACTAAAGAGATCATAACAAGAGCAACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTATCCAAGATCCCTGAAGAGGTTAAACAAGAGCTTGTTCCTTTTTACCTAAATAGGCTTGCCGTTCCTACCGAAGAAGTAGATTGTGAAAAGATAGACAAACTCACTGATGGCACTGCTGAGAGAGTCCGATCTGGATTGGCTCCAAGGTGGAACGACATGGATGCTAACCAGCATGTCAACAATGTGAAATACATTGGATGGATTTTAGAGAGCGTGCCAATTGAAGTGCTAGAAGATTATAACATGACAAGCATGACTTTGGAGTATCGGCGTGAGTGTACACAAACAAACTTGGTGGAATCCATGACGTGTCCAACAGCAAGAGTTATTGAGTCCAATAACAATTCCAAGAACAGAAAACCCGACCTGCAATACACACACTTGCTTCGTCTGCAACAAGATAAAGCAGACGTTGTCCGAGCCAGAACTGAATGGAATTTTAAGCAAAAGCAACAGTGA 1143 0.4147 MAAINNIGLHFLGNLSDAKKDNVLRPSFYSPCNTTNMSNNKRRFLSVSASYNDSPRKMDTANRVNVNGIHVVEAPLQAGKLAKESAADEAIVTSLRGRFVEGKLVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTCSGIGGGGFGATREMSLRKLIWVVTRIQVQVQRYNKWGDEIEVDTWVDAAGKNGMRRDWLIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELVPFYLNRLAVPTEEVDCEKIDKLTDGTAERVRSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEDYNMTSMTLEYRRECTQTNLVESMTCPTARVIESNNNSKNRKPDLQYTHLLRLQQDKADVVRARTEWNFKQKQQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01860 380 CDD 4HBT 106 222 - -
Pumo10g01860 380 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 273 373 IPR029069 -
Pumo10g01860 380 Pfam Acyl-ACP thioesterase 104 374 IPR002864 GO:0006633|GO:0016790
Pumo10g01860 380 Gene3D Hotdog Thioesterase 97 379 - -
Pumo10g01860 380 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 76 377 IPR045023 GO:0006633|GO:0016297
Pumo10g01860 380 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 103 247 IPR029069 -
Pumo10g01860 380 FunFam Acyl-[acyl-carrier-protein] hydrolase 97 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01860 Pumo-Chr10 24573136 24575506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01860 97 376 Acyl Lipid Metabolism Gene Families AT1G08510 57.857 9.03e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01860 K10781 - gmx:100791281 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01860 10 24573136 24575506 Pumo10g01860 10 24573136 24575506 ECH