Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01858 ATGACATCAATGGTGGCACCCATCAACGTCGGGCTACAATTTCGAGGAAATTGGTGCAATGCCAAGAAGAAAATTGTAGACAAGCTGGGAGGGGAGTTTTTGAAGCCGAGCTTTAATTCCTCACCCAACACTAATGCATTCAACAATAAAGTAAGATTTTCATTGTTGGTGAGTGCAAGTTCTCATTGTAGTCCTGGGGGAATGGACACAATCAATGAAATGAAACATGTTCCATTGGTTCATCCTACAGCAGGCAAGTTGGCAAATGAAAACACAGAACATACAACCCTTGTTACCTTGTTTCGTGGAAGGTTTGTGGAGGACAGGTTTGTATATAGGCAAATTTTCTTTGTCAGGTCTTACGAAATTGGCCCAGATAAAACTATCACCATGGAGACTCTCATGAATTTTCTCCAGGAAACTTCTCTAAATCATGTCTCCAGCTGTGGAGTAAGTCAGAACGATTTTGGAGCCACTCACGAAATGGACCTTCGCAAACTCATTTGGGTGGTTACTCGTATTCAGGTTCAAGTACAGAGATATAGCAAATGGAGGGATGAAATTGAGGTTGAAACTTGGTTTGATGTTGCCGGTAAGAATGGGACGCGAAGAGATTGGATAATCAGGGATCATTATACCAAAGAGATCATAGCTAAAGCAACCAGCACATGGGCGATCATGAATAGAGAAACACGAAGATTATCCAAGATACCTGAAGAAGTTAGGCAAGAACTTGATCCTTTCTACTTTAATAGGTTTGCCATTGCCAGGGAAGAAATAGATCATCAGAAGATACAAAAGCTCACTGACGCCACTGCTGAGGGTTTTCGATTTGGAGTGACTCCAGGGTGGAACGACATGGATGTTAACCAGCATGTTAACAATGTAAGATACATCAGATGGATCTTAGAGAGCGTGCCAAGAGAAGTATTAGAAGATTATAAAATGACAAGCATGACTTTAGAGTTTCGGCGTGAATGTACACAATCAGATTTGTTGGAATCAATGACTAGTCCAACATCCAGGGTGATTGATGCCTCTAATAATAATAACTTTGTTACCAGAAAACCCAACCTACAATATATACACCTGCTTCGTCTACAAGACAATAAAGTGGAGTTGGTCCGAGCCAGAACAGAATGGCATCTTAAGCAAAACCAAAAGTGA 1167 0.4105 MTSMVAPINVGLQFRGNWCNAKKKIVDKLGGEFLKPSFNSSPNTNAFNNKVRFSLLVSASSHCSPGGMDTINEMKHVPLVHPTAGKLANENTEHTTLVTLFRGRFVEDRFVYRQIFFVRSYEIGPDKTITMETLMNFLQETSLNHVSSCGVSQNDFGATHEMDLRKLIWVVTRIQVQVQRYSKWRDEIEVETWFDVAGKNGTRRDWIIRDHYTKEIIAKATSTWAIMNRETRRLSKIPEEVRQELDPFYFNRFAIAREEIDHQKIQKLTDATAEGFRFGVTPGWNDMDVNQHVNNVRYIRWILESVPREVLEDYKMTSMTLEFRRECTQSDLLESMTSPTSRVIDASNNNNFVTRKPNLQYIHLLRLQDNKVELVRARTEWHLKQNQK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01858 388 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 106 253 IPR029069 -
Pumo10g01858 388 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 83 385 IPR045023 GO:0006633|GO:0016297
Pumo10g01858 388 CDD 4HBT 118 228 - -
Pumo10g01858 388 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 268 382 IPR029069 -
Pumo10g01858 388 Gene3D Hotdog Thioesterase 103 387 - -
Pumo10g01858 388 FunFam Acyl-[acyl-carrier-protein] hydrolase 103 387 - -
Pumo10g01858 388 Pfam Acyl-ACP thioesterase 111 382 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01858 Pumo-Chr10 24544805 24547532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01858 103 384 Acyl Lipid Metabolism Gene Families AT1G08510 50.709 2.13e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01858 K10781 - gmx:100791811 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01858 10 24544805 24547532 Pumo10g01858 10 24544805 24547532 ECH