Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01857 ATGGGCAAGTTGTGGACCTTGATCATGCAGCTTCATTCTATTGCTGGGCCGGTTGTGACGTTATTGTACCCTTTGTATGCTTCGGTGGTAGCAATAGAGAGCCAATCCAAGTTGGATGACGAGCAATGGCTAGCTTATTGGATCATCTATTCGTTCCTCACCCTTGCGGAAATGGTTCTTCAACCCATCTTAGAGTGGATACCAATTTGGTACGATGTGAAGCTATTGACGGTGGCATGGCTGGTGTTGCCGCAGTTCGCAGGAGCTTCGTACTTGTATGAAAGGTTCGTGAGAGAGCATATAAGGAAATACATAACGGAGAGGGACCATCTCCATGTCAACCACCAGCAACAAAGCAAAAAGTCTCCCAACGGGGGCAAGGCCAATAAGAAATTCGTCGAATTCGTCACGCCCAAGAAAGTGAGTTAA 429 0.4709 MGKLWTLIMQLHSIAGPVVTLLYPLYASVVAIESQSKLDDEQWLAYWIIYSFLTLAEMVLQPILEWIPIWYDVKLLTVAWLVLPQFAGASYLYERFVREHIRKYITERDHLHVNHQQQSKKSPNGGKANKKFVEFVTPKKVS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01857 142 PANTHER HVA22-LIKE PROTEINS 11 115 IPR004345 -
Pumo10g01857 142 Pfam TB2/DP1, HVA22 family 24 99 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01857 Pumo-Chr10 24523098 24524207 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01857 K17279 - gmx:100813655 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01857 10 24523098 24524207 Pumo10g01857 10 24523098 24524207 ECH